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Name : clpC (SRM_01510) Accession : YP_003571383.1 Strain : Salinibacter ruber M8 Genome accession: NC_014032 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATPase subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1720929 - 1723556 bp Length : 2628 bp Strand : - Note : - DNA sequence : ATGGAAGGCAATTTCTCAAATCGCGTCCGGGACGTTATTTCCTACAGCCGCGAAGAGGCGGTGCGACTCGGGCACGATTA CATCGGTACGGAGCACCTCTTGCTTGGGCTCATCCGGGAAGGCGACGGAATCGCGGTGAAGATTCTCCGCAACCTCGGGT GTGACCTGTTGGAGCTCAAGGAGGCCGTGGAGGACACGGTCCGAAGCACCAGCAGCTCCACCTCGGTGGGGAACATCCCC CTTACCAAGCAGGCCGAGAAGGTGCTCAAGATTACGTACCTGGAGGCGAAGCTCTACAAGAGCGACGTCATTGGGACGGA GCACCTCCTCCTGAGCCTGCTCCGGGACGATGAGAACATCGCCGCGCAAATTCTCCAACAAGGCTTTTCAGTAACGTACG ACGCCGTGAGAAACGAGCTAGACTCCATTATTAGTGGCAAGGCCTCTTCCTCTTCCAGCGGCAGCGGTGGATCCGGCGGT CGTCTCTCCTCCGGCTACGGGCAGGAGAGCAGCGAGTCGGAGAACAGCAACACGCCGGTCCTGGACAACTTCGGCCGGGA CCTGACGGAGCTGGCGGAGGAGGATGAACTCGATCCCATCATCGGGCGCGAGGAAGAGATCAAGCGTGTCGCCCAGATCC TGAGCCGACGCAAGAAGAACAACCCGGTTCTCATTGGGGAGCCGGGCGTCGGGAAAACCGCCATCGCGGAGGGGCTTGCC GCGCGGATCGTGGATCGCAAGGTCAGCCGCGTGCTCTACGACAAGCGCATCGTCACGCTCGACCTTGCCTCCCTCGTGGC CGGCACCAAGTACCGGGGCCAGTTCGAGGAGCGGATGAAGGCCGTGATGAAGGAGCTGGAGGACAACGACGACATCATCC TCTTCATCGACGAGATCCACACCATCGTCGGGGCCGGCGGGGCGTCCGGCAGCCTGGACGCGTCGAACATGTTCAAGCCC GCGCTCGCCCGCGGCGACTTGCAGTGCATCGGGGCGACCACGCTCGACGAGTACCGCCAAAACATTGAGGGCGACGGCGC GCTCGACCGCCGCTTTCAGAAGATTATCGTCGACCCGTCGACGCCCGAGGAGACGGTCAACATCCTCTCGAACATCAAGT CCTACTACGAGGACCACCACAACGTCCGCTTCTCCGAGGAGGCGATCGACCTGGCGGTCCAGTTGAGCGACCGCTATATC ACCGATCGCTTCCTGCCGGACAAGGCCATCGACGTGATGGACGAGGCCGGCGCGCGGGTTCACCTCTCCAACATCGAGGT CCCGCCCGAGATTCTGGAGCTTGAGGAGCAGATCGAGGATGTCCAGGAGGAGAAAAACCAGGTCGTCAAGAGCCAGCGGT TCGAAGAGGCGGCCCGCCTCCGCGACAAGGAGAAGACGCTTCAGGAGGAACTGGAGGAGGCCAAGCAGCAGTGGCACGAG CAGGCCGAGACCGAAGTCCACGACGTCACCTCGGAGGAGATCGCCGAAGTGGTGGCCATGATGACGGGCATTCCGGTCGA CAAGATCAGCGAGCCGGAGCAGCAGAAGCTCCTCAAGATGGAGGAGTCGCTCAAGGAGCACGTGGTGGGACAGGACGAAG CCATCGAGAAGCTGTCGAAGGCCATCCGTCGCACCCGTGCCGGCCTGAAGGACCCGGAGAAGCCCATTGGTTCCTTCATT TTCCTCGGGCCCACCGGCGTCGGCAAGACCGAGCTGGCCAAGGTTCTCACCGAGTACCTCTTCGACTCGCAGGAGTCGCT CATCCGGATCGACATGAGCGAGTACATGGAGAAGTTCTCCGTCAGCCGACTCGTGGGGGCCCCGCCGGGATACGTGGGCC ACGAGGAAGGCGGCCAGCTGACCGAGAAGGTGCGCCGGAAGCCGTACTCCGTGGTCCTGCTCGACGAGATTGAGAAGGCC CACCCGGATGTCTCCAACATCCTCCTGCAGGTCCTGGACGATGGGATCCTGACCGACGGCATGGGGCGGGAGGTCGACTT CCGCAATACGATCCTCATCATGACCTCCAACATCGGCACGCAGGACATCAAGTCCTTCGGCCAGGGGATTGGGTTCGACC AGACGGACGGGGAAGACATGGACTACACGTCCATGAAGTCCACCGTTCAGGACGCCCTCAAGAACGTCTTCAACCCGGAG TTCCTGAACCGGCTCGACGACGTGATCGTCTTCAACCCGCTCAACAAGGAGAACATCTTCGACATCATCGACATCATGTC GGAGGATCTCTTCGAGCGGGCCGAGGAGCTTGGCCTCGACCTCGAGTTCGACGAGGCCGCCAAGGAATTCCTAACGGACC GCGGGTTCGACCAGAAGTATGGCGCCCGGCCGCTCCGCAGGGCCCTTCAGAAGTACGTGCAGGACCCGATGGCCGAAGAC ATCCTCCACGACGAGATCACGGAGGGCGACACGGTCCTCATCACGCACGACGGCGAATCGGAGGAGCTGTCCTTCGAGGT CGAGGAGGGCGAGGCCCCGACGGAGGAGACCCCGACAGACGCAAACGGAGAGGCCAACAGCGTCTCCGCCGAAGAGGTTG CCGAGGGCGCGTCCACCGACGAGAACGGATCCGGTGAGGAGCCCTCAACAGCTTCCGACGAGGAGTAG Protein sequence : MEGNFSNRVRDVISYSREEAVRLGHDYIGTEHLLLGLIREGDGIAVKILRNLGCDLLELKEAVEDTVRSTSSSTSVGNIP LTKQAEKVLKITYLEAKLYKSDVIGTEHLLLSLLRDDENIAAQILQQGFSVTYDAVRNELDSIISGKASSSSSGSGGSGG RLSSGYGQESSESENSNTPVLDNFGRDLTELAEEDELDPIIGREEEIKRVAQILSRRKKNNPVLIGEPGVGKTAIAEGLA ARIVDRKVSRVLYDKRIVTLDLASLVAGTKYRGQFEERMKAVMKELEDNDDIILFIDEIHTIVGAGGASGSLDASNMFKP ALARGDLQCIGATTLDEYRQNIEGDGALDRRFQKIIVDPSTPEETVNILSNIKSYYEDHHNVRFSEEAIDLAVQLSDRYI TDRFLPDKAIDVMDEAGARVHLSNIEVPPEILELEEQIEDVQEEKNQVVKSQRFEEAARLRDKEKTLQEELEEAKQQWHE QAETEVHDVTSEEIAEVVAMMTGIPVDKISEPEQQKLLKMEESLKEHVVGQDEAIEKLSKAIRRTRAGLKDPEKPIGSFI FLGPTGVGKTELAKVLTEYLFDSQESLIRIDMSEYMEKFSVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKA HPDVSNILLQVLDDGILTDGMGREVDFRNTILIMTSNIGTQDIKSFGQGIGFDQTDGEDMDYTSMKSTVQDALKNVFNPE FLNRLDDVIVFNPLNKENIFDIIDIMSEDLFERAEELGLDLEFDEAAKEFLTDRGFDQKYGARPLRRALQKYVQDPMAED ILHDEITEGDTVLITHDGESEELSFEVEEGEAPTEETPTDANGEANSVSAEEVAEGASTDENGSGEEPSTASDEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003571383.1 | ATP-dependent Clp protease, ATPase subunit | VFG0079 | Protein | 0.0 | 53 |
| clpC | YP_003571383.1 | ATP-dependent Clp protease, ATPase subunit | VFG0080 | Protein | 3e-146 | 52 |
