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Name : lysS (SRM_01097) Accession : YP_003570970.1 Strain : Salinibacter ruber M8 Genome accession: NC_014032 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1259391 - 1260935 bp Length : 1545 bp Strand : + Note : - DNA sequence : ATGTCCCCCGCATCCTCAGAGCTCAGTGAACAGGAACAGCGCCGACGTGAGGAGCGCGACGCGCTCGAACGGCGCGGCAT CGACCCCTACCCCTACGCGTGGGACGTGGATGCCCACGCCGACGAGATCCTCAATACGTTCGACGACGACCTGCATCAGC CGGAGGATGGCGAGGTCGGGGGGTACAAGGTCTCCGTTGCCGGCCGCATCACGGGGCTTCGGGTGATGGGGGGCTCGGCG TTCTTCGACCTCCGGGACGAGACGGGCACGATTCAGGTCTACGTGCGCTCCCAGGATCTGGGCGACGACTTCTACGACGA GGTCTTTACGGAGCTGTTCGACATCGGCGACATCGTGGGGGTCGAGGGGTTCGTCTTCCGGACGGGGATGGGGGAGGTGA CCGTCCGGGCCGCCGACGAATTTCAGTTGCTGGCGAAGGCCCTGCGGCCGTTGCCGGTGGTGAAGGAGACCGAGGAGGAG ACCTATTACGAGGTGACGGACAAGGAATTCCGGTACCGGCAGCGGTACGTCGACCTCGCAGTAAACGAGGATGTGCGGGG CGTCTTTCGGCAGCGGTCCGAACTCATCTCCACGATGCGTCGCTTCCTGGACGAGCAAGGATGCTTGGAGGTGGAGACGC CCGTCCTCCAGCCCGTGTACGGCGGGGCGTCGGCCGCCCCGTTCGAGACGCACCACAACGCGCTCGACATGCCGCTCTAC CTCCGCATCGCGGACGAGCTGTACCTGAAGCGGCTGTTGGTGGGGGGCTTTGAGGGGGTCTACGAGATCGGGAAGGACTT TCGGAATGAGGGCCTGAGCCGGTTCCACAATCCGGAGTTCACCATGATGGAGTGCTACGTGGCCTACAAGGACTACCGGT GGATGATGGACCTGACGGAGGACTTTCTCCGCACGGCCGCCACTGCGCTGCACGACACGCCCACGGTGGCCTTCGAGGGA CACGAGATCGACTTCGGGGGGGGATGGACACGAATTCCGTTCTTCGAAGCCATCGAGGAGGCGACCGGCTTCGACCTGTA CCGGGCCGGGGCCGATCGGGTCTACGACGTGGCGGCGAACGAATTGGGGCTGGAGGAGGTCGAGGCCGACATGGGCCTTG GCGGGCTCCTCGACGAGATCTTCAGCGAAACGGTGGAGCCGACGCTCGTCCAACCCACCTTCGTGACCGATTATCCGATT GAGCTGAGTCCCCTCGCCAAAAAGCACCGCGAGAAAGAGGGGCTCGTGGAGCGGTTCGAGCTCGTGGTGGCGGGGCGTGA GGTGGCCAACGCCTTTAGCGAGCTCAACGACCCGCAGGATCAGCGTGAGCGGTTTGAGCGGCAGGCGCGCCAACGCGCCG CGGAGGTGGACGATGATGTGGATCCGGAAGACTTGATCGATGAGGATTACCTCCGGGCCCTGGAGTACGGCATGCCGCCT GCGGCCGGGCTGGGCGTCGGCATCGACCGCCTCACCATGATCCTTACCGGGCAGGAGTCGATCCGCGACGTCATTCTCTT CCCCCTGCTCCGCCCCGAGCAGTAG Protein sequence : MSPASSELSEQEQRRREERDALERRGIDPYPYAWDVDAHADEILNTFDDDLHQPEDGEVGGYKVSVAGRITGLRVMGGSA FFDLRDETGTIQVYVRSQDLGDDFYDEVFTELFDIGDIVGVEGFVFRTGMGEVTVRAADEFQLLAKALRPLPVVKETEEE TYYEVTDKEFRYRQRYVDLAVNEDVRGVFRQRSELISTMRRFLDEQGCLEVETPVLQPVYGGASAAPFETHHNALDMPLY LRIADELYLKRLLVGGFEGVYEIGKDFRNEGLSRFHNPEFTMMECYVAYKDYRWMMDLTEDFLRTAATALHDTPTVAFEG HEIDFGGGWTRIPFFEAIEEATGFDLYRAGADRVYDVAANELGLEEVEADMGLGGLLDEIFSETVEPTLVQPTFVTDYPI ELSPLAKKHREKEGLVERFELVVAGREVANAFSELNDPQDQRERFERQARQRAAEVDDDVDPEDLIDEDYLRALEYGMPP AAGLGVGIDRLTMILTGQESIRDVILFPLLRPEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-77 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003570970.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-77 | 44 |
