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Name : YPZ3_0299 (YPZ3_0299) Accession : YP_003566471.1 Strain : Yersinia pestis Z176003 Genome accession: NC_014029 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 354010 - 356049 bp Length : 2040 bp Strand : + Note : - DNA sequence : ATGCAACTCTACCTGTGCGAGAAACCCAGCCAGGGTAAAGATATCGGCGCCATTCTCGGGGCGACGCAGCGTAAGCAGGG TTACCTGGTGGGTGCAGGCGTCATTGTCACCTGGGCTATCGGGCATCTGCTGGAACAGGCCCAGCCGGAGACCTACGGTG AGCAATTCGGCAGTCCCTGGCGGGAGTCCGTTCTTCCTATCGTCCCTGCCCAGTGGAAAATGGCGGTAAAAAAAGATACT GCCGATCAGTTCGCTGTCATCCGCGGGTTGCTCAAACAGGTTGATTCTGTGGTGATTGCGACCGATGCGGATCGCGAGGG GGAAGTGATCGCGCGGGAGTTACTGGAACATTGCCACTTTACCGGCCCGGTCCAGCGGCTCTGGTTGTCAGCGCTGGACG AGGCCAGTATTCGGCACGCCCTGGCGAACAAGCTCCCAGGCGAGAAGACTGCGCCCCTGTATGAAGCTGGCCTGGCGCGA TCACGGGCTGACTGGATGACGGGGATGAATTTAACCCGGCTTTACACGCTCAAAGCCCGCGAGCAGGGATACGGCGAGGT GTTGTCGATCGGGCGTGTGCAGACCCCCACACTGGCGCTGGTCGTGAACCGTGACCGCGACATTGCCAACTTCATCTCCA AACCGTACTGGCAGGTCAGGACGATGCTGCAGAAAGATGGGATCGCCTTCCCGGCAAACTGGGTACCTGCCGTCAATTAC TGTGATGAAGAGAAGCGCTGTATTCAACAGAATGTGGCGCAGGCCGTCGTGCAGCTGTGTCAGCAAACGGCTAATGCCGT TGTGCTTGATGTGGGGACCGAACGCAAGAAAGAGTCCGCGCCGTTGGCCTTTGACCTGGGCATCCTGCAGCAGGCCTGCT CACGCAAGTGGGGGATGAGCGCCAACCAGGTCCTGAGTATAGCGCAGTCACTGTATGAGACGCACAAGGCCACCACGTAT CCCCGGACGGATTGCGGCTATCTGCCGACATCGATGCGGGAAGAGGTTGCAGACGTGCTGAGCGCTGTTACCCGCACGGA CCCAACGCAGAGTGAAAGCGTGGCCAGGCTCGACAGGACTTTTGTTTCCCGTATCTGGAACGACAAAAAAATCACGGCGC ACCACGGGATTATCCCAACCAAACAGCCGTTCGACCTGAGTAAACTGTCTGCCGACGAGCTCAAGGTCTATCAGCTGATC CGGCAGCATTACCTGGCACAGTTCCTGCCGTTACATGAAGTGGATGTCACGGAAGCGACATTCAATATCGGCGGGCAACT GTTCCGCACTCGCGGCAAGGTCGAGGCGGTAGCTGGATGGAAAGCGTTGTTCCAGCATGACGCGAGCGAGGCGAAAGAGG AGCCTGCCGACACGGATGATGTCCGGTTGCCTGCCCTGGTAAAAGGTGAAGCCGTCTCGGTTGCCGGCGCTGAGCTCAAA ACGCTGCAGACGAAGCCCCCGGGACATTTTACCGACGGGACATTGATCGCCGCCATGAAAAATGCAGCGGCGTTCGTCAG TGACCCGCAACTGAAGAAAGTGTTGAAAGAGAACGCAGGGCTGGGTACTGAGGCGACTCGTGCCGGTATCCTGGAAACGT TGTTTAAAAGGGGCTATCTGGAGAAGAAAGGTAAATTTTTGTTGTCGACGCCGATCGCCGGCGAGCTGATTGATGCTTTG CCGACGGCACTGACGAACCCGGGCATGACAGCGCTCTGGGAGCAGGCGCTGGACGAGATTGCCCAGGGCCAGATGACACT CGATACGTTCATGAGCCGCCAGGCTCAGTGGACGGGGCACCTGGTAGAGAAAGGGAAGGCGCAAGCCGTGAAGTTTACCG CGCCACCTTCACCGCCGTGCCCGACATGCAGCGGGACGATGCGCCGGCGCGCCGGGAAGAAAGGTGGTGGCGCCTTCTGG GGCTGCAGTAATTACCCCACTTGCCAGGGCATCATTAACATCGATGCAAAAGGTGGTCGCAAGGCTAAGCGCTATAAAGC AAAATCACCGGCTAAAAATAAAGCAACCGGATCGGAGTAA Protein sequence : MQLYLCEKPSQGKDIGAILGATQRKQGYLVGAGVIVTWAIGHLLEQAQPETYGEQFGSPWRESVLPIVPAQWKMAVKKDT ADQFAVIRGLLKQVDSVVIATDADREGEVIARELLEHCHFTGPVQRLWLSALDEASIRHALANKLPGEKTAPLYEAGLAR SRADWMTGMNLTRLYTLKAREQGYGEVLSIGRVQTPTLALVVNRDRDIANFISKPYWQVRTMLQKDGIAFPANWVPAVNY CDEEKRCIQQNVAQAVVQLCQQTANAVVLDVGTERKKESAPLAFDLGILQQACSRKWGMSANQVLSIAQSLYETHKATTY PRTDCGYLPTSMREEVADVLSAVTRTDPTQSESVARLDRTFVSRIWNDKKITAHHGIIPTKQPFDLSKLSADELKVYQLI RQHYLAQFLPLHEVDVTEATFNIGGQLFRTRGKVEAVAGWKALFQHDASEAKEEPADTDDVRLPALVKGEAVSVAGAELK TLQTKPPGHFTDGTLIAAMKNAAAFVSDPQLKKVLKENAGLGTEATRAGILETLFKRGYLEKKGKFLLSTPIAGELIDAL PTALTNPGMTALWEQALDEIAQGQMTLDTFMSRQAQWTGHLVEKGKAQAVKFTAPPSPPCPTCSGTMRRRAGKKGGGAFW GCSNYPTCQGIINIDAKGGRKAKRYKAKSPAKNKATGSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 65 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 65 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 65 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 58 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 2e-163 | 54 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 3e-164 | 52 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 3e-154 | 51 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 3e-152 | 50 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 2e-120 | 43 |
