Gene Information

Name : ribD (YPZ3_2801)
Accession : YP_003568973.1
Strain : Yersinia pestis Z176003
Genome accession: NC_014029
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 3597696 - 3598805 bp
Length : 1110 bp
Strand : -
Note : -

DNA sequence :
ATGCAGCCCGATGAGTTCTATATGGCCCGAGCTTTTGAACTGGCGCGTTTGGGGCGCTTTACGACGTCGCCTAACCCCAA
TGTAGGCTGTGTCTTGGTTCGTGATGGCGAGATCGTCGGCGAAGGTTACCACTTACGTGCTGGAGAGCCGCATGCTGAAG
TGCATGCGTTACGTATGGCGGGTGAGAAAGCGCGAGGAGCCACGGCTTATGTCACTCTTGAGCCGTGTAGCCATTATGGT
CGGACGCCACCTTGTGCTGATGCGTTGGTCGCCGCAGGTGTGATACGGGTTGTTGCTGCCATGCAGGATCCTAATCCAGA
AGTTGCCGGGCGAGGGCTGTATAAATTAAAACAGGCCGGTATCGCTGTCGATCATGGCTTGATGTTAGCTGAGGCCGAGG
CTGTTAACCTTGGTTTCTTGAAGCGTATGCGGACTGGTTTCCCTTATGTGCAATTGAAAATGGCGGCATCATTGGACGGG
CGTACAGCCATGGCATCAGGTGAGAGCCAGTGGATTACCTCACCACAGGCACGCCAGGATGTGCAACGCTTTAGGGCCGA
GAGTTCAGCTATTCTCAGTACCAGTGCCACAGTATTGGCAGATGACCCTTCGCTGACGGTACGCTGGCAGGATTTAGATG
CCGAAACGCAGGTTTTGTATCCTCATGATAGTGTTCGACAGCCAGTAAAAATTATACTCGATAGCCATAACCGCGTGACT
CCACGGCATAAAGTGATACAGCAAGACGGCCCATGCTGGCTGGCTCGCGTAGATGCCGATGATCAGCCATGGCCTGGCAA
TATCGAACAACTGTTGCTACCACGTTATGGTAATGGCGTGGACTTGGTTGTGTTGATGATGCAATTGGGGAAACGGAATA
TTAACTCTGTCTGGGTAGAGGCTGGGCCACAACTGGCGGGTGCATTGTTACAAGCCGGAGTGGTGGATGAGTTAATCCTT
TATATCGCCCCCAAACTCTTGGGCAGTGATGCGCGTGGATTATGCGAGCTAGCTGGGCTGACGAATTTATCGCAAGCGCC
TGAGTTTGCATTTAGCGATGTACGGCTGGTCGGTCCGGACTTGCGTTTACGCTTGAAGCCAAAGTATTAA

Protein sequence :
MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMAGEKARGATAYVTLEPCSHYG
RTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAGIAVDHGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDG
RTAMASGESQWITSPQARQDVQRFRAESSAILSTSATVLADDPSLTVRWQDLDAETQVLYPHDSVRQPVKIILDSHNRVT
PRHKVIQQDGPCWLARVDADDQPWPGNIEQLLLPRYGNGVDLVVLMMQLGKRNINSVWVEAGPQLAGALLQAGVVDELIL
YIAPKLLGSDARGLCELAGLTNLSQAPEFAFSDVRLVGPDLRLRLKPKY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-59 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-59 49