Gene Information

Name : nrdE (YPZ3_2338)
Accession : YP_003568510.1
Strain : Yersinia pestis Z176003
Genome accession: NC_014029
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : -
Position : 3033533 - 3035683 bp
Length : 2151 bp
Strand : -
Note : -

DNA sequence :
TTGGCAACGACAAAACTGAACGTCATCGATTCATCCGACAGTGAGCTGGATTATCACTCACTGAATGCAATGCTGAACCT
TTATGATGCTGATGGGCGTATCCAGTTTGATAAAGACCGGCTGGCCGCACGGCAATACTTTTTGCAGCACGTTAATCAAA
ACACGGTGTTCTTCCATAATCTACAGGAAAAAATTGATTACCTGATTGAGGAGGGATATTACGAAAAAGAGGTTCTGGAT
CAATACGATTTTAGCTTTATCAAAAGTCTATTCCAGCAAGCCTATAGCAAAAAATTTCGTTTCCCCACTTTTCTCGGGGC
GTTTAAATATTACACCAGCTACACCCTAAAAACCTTTGATGGCAAACGTTACCTGGAACGCTATGAAGATCGCGTTTGCA
TGGTCGCACTGACACTGGCTACAGGTAACCAGACACTGGCGCGGGAACTGGTAGAAGAAATTATCTCTGGCCGCTTCCAA
CCCGCCACACCAACCTTCCTCAATTGTGGCAAAAAACAACGTGGTGAACTGGTCTCCTGCTTCCTGTTGCGTATCGAAGA
CAATATGGAATCCATTGGCCGCTCGATTAACTCGGCACTGCAACTCTCTAAACGTGGCGGAGGCGTGGCGTTCCTCCTCA
GCAATATCCGTGAGGTGGGTGCTCCCATCAAACGGATTGAAAATCAGTCTTCGGGTGTTATCCCGATAATGAAAATGTTG
GAGGACGCGTTCTCCTATGCCAATCAGTTGGGTGCCCGTCAGGGGGCGGGGGCGGTCTATCTCCATGCCCATCATCCAGA
TATTTTGCGTTTTCTGGATACCAAGCGGGAAAATGCCGATGAAAAAGTACGGATTAAGACCTTATCGTTGGGGGTGGTGA
TACCGGATATCACTTTTGAACTGGCGAAGAATAATGAAGAAATGTACCTGTTTTCACCTTATGACATTGAACAGGTTTAC
GGCGTGCCCATGTCTGAAATCAGCATCAGCGAAAAATACCGCGAAATGGTGGATAACAAACGCATCCGCAAAAGCAAAAT
TAAAGCCCGCGAGTTCTTCCAAATTCTGGCTGAGATCCAATTTGAATCTGGCTACCCTTATATGATGTTTGAAGATACGG
TTAATCGCGCTAATCCGATTAAAGGCCGGATTAATATGAGTAATTTGTGTTCGGAAATTTTGCAGGTCAACGCCCCCACT
GAATACCACGAAGACCTCAGCTATCGCCGTATCGGGAAAGATATCTCCTGTAATCTTGGCTCGCTGAATATCGCGCAGGT
GATGGATTCACCCGATTTTGGTAAATCCATTGAGATCGCCATTCGTGGGCTCACTGCCGTATCTGAAATGAGCAATATTC
GCTCAGTGCCATCCATTGAAAAAGGCAATCAAGAATCACATGCCATTGGCCTTGGGCAGATGAACCTGCACGGTTATCTG
GCGCGGGAGCGTCTTTTTTACGGCTCGGAAGAGGCGTTGGATTTTACCAATATCTATTTTTATACCGTGGCGTATCACGC
GATCCGTGCCTCAAACCAGTTGGCAATAGAACGGGCCAGCCATTTCAAAGGCTTCGATGAATCAGATTATGCTTCGGGTG
CTTTCTTCAGCAAATATATCGAGCAAAGCTGGCAGCCAAAAACAGCAAGAGTACAGGCACTGTTTGCCGATGCCGGTATT
GCCATACCAAACCAACAAGATTGGATCGCGCTACGGCAATCCGTTATGGAACACGGTATTTATAATCAGAACCTACAGGC
GGTGCCACCAACAGGCTCTATTTCCTATATCAATCATTCGACATCAAGTATCCACCCGATTGTCTCTCCGATTGAGATCC
GTAAAGAAGGCAAAATAGGCCGTGTTTATTATCCCGCACCCTATATGACCAACGATAACCTTGAATATTATCAAGATGCC
TACCAGATCGGGCCTGAAAAAATCATCGATACCTATGCCGCAGCGACCCAACATGTTGATCAGGGCCTCTCTCTGACGCT
GTTCTTCCGTGATACCGCTACCACCCGCGATATTAACAAAGCACAGATTTACGCTTGGAAGAAAGGGATCAAGACCATTT
ATTACATCCGGCTACGTCAGATGGCATTAGAGGGAACCGAAGTCGAGGGCTGCGTTTCCTGTTCGCTGTAA

Protein sequence :
MATTKLNVIDSSDSELDYHSLNAMLNLYDADGRIQFDKDRLAARQYFLQHVNQNTVFFHNLQEKIDYLIEEGYYEKEVLD
QYDFSFIKSLFQQAYSKKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRVCMVALTLATGNQTLARELVEEIISGRFQ
PATPTFLNCGKKQRGELVSCFLLRIEDNMESIGRSINSALQLSKRGGGVAFLLSNIREVGAPIKRIENQSSGVIPIMKML
EDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKVRIKTLSLGVVIPDITFELAKNNEEMYLFSPYDIEQVY
GVPMSEISISEKYREMVDNKRIRKSKIKAREFFQILAEIQFESGYPYMMFEDTVNRANPIKGRINMSNLCSEILQVNAPT
EYHEDLSYRRIGKDISCNLGSLNIAQVMDSPDFGKSIEIAIRGLTAVSEMSNIRSVPSIEKGNQESHAIGLGQMNLHGYL
ARERLFYGSEEALDFTNIYFYTVAYHAIRASNQLAIERASHFKGFDESDYASGAFFSKYIEQSWQPKTARVQALFADAGI
AIPNQQDWIALRQSVMEHGIYNQNLQAVPPTGSISYINHSTSSIHPIVSPIEIRKEGKIGRVYYPAPYMTNDNLEYYQDA
YQIGPEKIIDTYAAATQHVDQGLSLTLFFRDTATTRDINKAQIYAWKKGIKTIYYIRLRQMALEGTEVEGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 76