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Name : clpC (BMQ_0107) Accession : YP_003560654.1 Strain : Bacillus megaterium QM B1551 Genome accession: NC_014019 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 97377 - 99815 bp Length : 2439 bp Strand : + Note : - DNA sequence : ATGTTTGGTAGATTTACAGAGCGCGCACAAAAAGTATTAGCTTTAGCACAGGAAGAAGCACTACGCCTAGGTCACAACAA CATTGGAACAGAGCATATTTTATTAGGTATCGTTCGTGAAGGTGAAGGAATTGCAGCAAAAGCTCTTTCTGCTCTAGGCC TAAGCACTGAAAAAATTCAAAAAGAAGTGGAAGCATTAATTGGCAGAGGCCAAGAATTAACGCAGACCATTCATTATACA CCTCGAGCGAAAAAAGTCATTGAACTTTCAATGGACGAAGCCCGAAAGCTTGGTCATTCTTATGTAGGAACAGAACATAT CTTACTAGGCTTAATTCGTGAAGGTGAAGGCGTTGCAGCACGCGTTTTAAATAATTTAGGTGTCAGCCTAAATAAAGCTC GTCAGCAAGTGCTTCATTTATTAGGTAGCAATGAAGCTGCTTCAAGCCATCAAGGCGGAGGCTCTTCAAATGCCAATACA CCTACGCTAGACAGCTTAGCACGCGATTTAACAGTTGTAGCGCGCGAAGGAAGCTTAGACCCTGTTATCGGACGTGGGAA AGAAATTCAGCGTGTTATTGAAGTGTTAAGCCGACGTACAAAAAACAATCCTGTATTAATTGGGGAGCCAGGTGTCGGTA AAACGGCAATCGCTGAAGGTTTGGCTCAGCAAATCGTCAACAATGAAGTTCCAGAAATTTTACGTGACAAACGCGTTATG ACTTTGGATATGGGAACGGTCGTTGCTGGTACAAAATACCGCGGAGAATTTGAAGATCGCCTGAAGAAAGTAATGGATGA AATTCGTCAAGCAGGTAATATCATTCTCTTTATCGATGAGTTACACACATTAATTGGCGCTGGTGGCGCAGAAGGAGCTA TCGATGCTTCTAATATTTTAAAACCGTCTCTTGCTCGTGGAGAACTTCAGTGTATCGGTGCCACCACTTTAGATGAATAC AGAAAGTACATTGAAAAAGATGCAGCGTTAGAGCGTCGCTTCCAGCCAATTCAAGTGGATGAACCAACGTTGGAAGAGTC TATTCAAATCTTAAAAGGGCTTCGTGACCGTTATGAAGCGCATCACCGAGTATCTATTTCTGATGAGGCAATCGAGCAAG CGGTGAAACTATCAGATCGCTACATTTCCGATCGTTTCTTACCGGATAAAGCAATCGATTTAATTGATGAAGCTGGTTCA AAAGTGCGTTTACGTTCATTTACAACGCCGCCAAATTTAAAGGAATTAGAGCAAAAATTAGAATCAGTACGCAATGAAAA AGATGCGTCTGTTCAAAGTCAAGAATTTGAAAAAGCAGCATCTTTACGCGATACAGAGCAACGCCTACGCGAAGAATTAG AAGACACAAAGAAAATTTGGAAAGAGCAGCAAGGTAAAGAAAACTCAGCTGTAACCGTAGAAGATATTGCGATGGTGGTA TCTAGCTGGACGGGTGTACCGGTCTCTAAACTGGCACAGGAAGAGACAGAAAGACTGCTGAACATGGAAGAGATTCTTCA CTCTCGTGTAATTGGGCAAGAAGAAGCGGTAAAAGCAGTTGCAAAAGCTGTGCGCCGTGCTAGAGCAGGCTTGAAAGATC CAAAACGTCCAATTGGTTCATTCATTTTCTTAGGACCAACAGGGGTTGGTAAAACAGAGCTTGCACGTGCATTAGCGGAG TCAATCTTCGGCGATGAAGATGCAATGATTCGTATCGATATGTCTGAGTACATGGAGAAACATTCTACTTCACGCTTAGT AGGTTCACCTCCAGGGTATGTTGGATACGAAGAAGGCGGCCAGTTAACGGAAAAAGTAAGAAGAAAACCTTACTCAGTTG TTCTTTTAGACGAAATTGAAAAAGCGCATCCGGATGTATTTAACATTTTATTACAAGTGTTAGAAGATGGACGCTTAACA GATTCAAAAGGTCGTACAGTTGATTTCCGTAATACGATTTTAATTATGACATCAAACGTAGGTGCTGATACATTAAAACG AAGCAAGCACTTAGGGTTCACAGTAGAAGCAGAAGGGCAAGACTACAAAGATATGAAAGGAAAAGTAATGGCGGAAATGA AGCGCGCGTTCCGTCCGGAGTTCTTAAACCGTATCGATGAAATTATCGTCTTCCATTCATTAGAGAAACCTCACTTAGCT GAAATCGTTAAATTAATGGCGGATCAGTTAACAAAACGCTTAAAAGAGCAAGAAATTGATCTTGAATTAACAAAAGAGGC AATCGATAAGATTGCAGAGGAAGGTTTTGATCCAGAATACGGTGCTCGTCCACTTCGTAGAGCAATTCAAAAACATATTG AAGACCGTTTATCTGAAGAGCTGCTAAAAGGGGTTGTTCAAAAAGGTCAGAAAGTGACGCTAGATGTAGACAAAGGAGAA TTTGTTGTTAAATCCTCCGCTCCAAGCAGCATCAGCTAA Protein sequence : MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGIVREGEGIAAKALSALGLSTEKIQKEVEALIGRGQELTQTIHYT PRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLHLLGSNEAASSHQGGGSSNANT PTLDSLARDLTVVAREGSLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVM TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY RKYIEKDAALERRFQPIQVDEPTLEESIQILKGLRDRYEAHHRVSISDEAIEQAVKLSDRYISDRFLPDKAIDLIDEAGS KVRLRSFTTPPNLKELEQKLESVRNEKDASVQSQEFEKAASLRDTEQRLREELEDTKKIWKEQQGKENSAVTVEDIAMVV SSWTGVPVSKLAQEETERLLNMEEILHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE SIFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT DSKGRTVDFRNTILIMTSNVGADTLKRSKHLGFTVEAEGQDYKDMKGKVMAEMKRAFRPEFLNRIDEIIVFHSLEKPHLA EIVKLMADQLTKRLKEQEIDLELTKEAIDKIAEEGFDPEYGARPLRRAIQKHIEDRLSEELLKGVVQKGQKVTLDVDKGE FVVKSSAPSSIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003560654.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 77 |
| clpC | YP_003560654.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 1e-152 | 52 |
