Gene Information

Name : YPZ3_pCD0064 (YPZ3_pCD0064)
Accession : YP_003560569.1
Strain :
Genome accession: NC_014017
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 65313 - 66068 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence :
ATGATGCAGAGCCGCACTGTATACAACTATCGTAGCCATCGTGACGATCGGGCTATTACTCAGCGAATACGGGAAATTGC
GGAGACGCGCATCCGTTATGGCTGTCCGCGCATTCATATCCTGCTGCGGAGAGAAGGCTGGCTTGTTAACCATAAGAAAA
CGCACCGTATTTACTGTCTTGAGGGTCTCAATCTACGTTCGAAACGTCCACGGCGGCATGTGACAGCGAAGCACAGGCAC
GCACGTCCAGAAGTGACCGCGTTAGAGCAGTGCTGGAGCATGGATTTCGTTGCTGATAATCTGTTCAACGGGCGTCGGGT
CAGGGCGCTAACTATAGTGGATAATTTTAGTCGTGAATGTCTGGCGATCGAGGTCGGTCAGGGGTTACGTGGAGATGATG
TTGTGGCTGTCATGGACAGATTAAAACATTCGCTGGGGCGTATTCCACAAAGGCTGCAGACAGATAACGGCAGCGAATTC
ATCTCGAAGTCGATGGACCGATGGGCGTATGAAAACAGGGTCACGATGGACTGTTCACGCCCCGGAAAGCCTACAGATAA
TGCCTTTATCGAGTCATTTAATGGCAGTCTGAGGGATGAATGTCTGAACGTGCACGGGTTCCTTTCTCTGGAAGATGCTC
AGGAGAAAATTGAACAATGGCGGCAAGAATATAATCATTTTCATCCGCATTCTTCGTTAAATAACCTGACTCCGGCAGAA
TTTGCCCGAAGTCATCAAAAAGGTCCGGATCTCTGA

Protein sequence :
MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTAKHRH
ARPEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEF
ISKSMDRWAYENRVTMDCSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFHPHSSLNNLTPAE
FARSHQKGPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-49 54
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 8e-38 48
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-44 46
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-41 44
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 1e-24 42