Gene Information

Name : tnpR (YPZ3_pCD0061)
Accession : YP_003560566.1
Strain :
Genome accession: NC_014017
Putative virulence/resistance : Resistance
Product : putative resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 63367 - 63918 bp
Length : 552 bp
Strand : +
Note : -

DNA sequence : 
ATGCGACTTTTTGGTTACGCGCGGGTATCAACCAGTCAGCAATCCCTCGATATTCAGATCAAAACACTCAAAGACGCGGG
CGTGAAAGCAAATCGTATATTTACTGATAAGGCATCCGGCAGCTCTGCCGACAGGGAGGGGCTGGATCTGCTGCGTATGA
AGGTGGAAGAAGGTGACGTCATTCTAGTGAAGAAGCTCGACCGTCTTGGCCGCGACACCGTCGACATGATCCAGTTGATA
AAAGAGTTTGACGCCCAGGGTGTGTCCATCCAGTTTATTGATGACGGAATCAGTACCGATGGGGAAATGGGTAAAATGGT
TGTCACTATTCTATCAGCAGTGGCTCAAGCCGAACGACAGAGAATACTGGAGCGTACAAATGAAGGGAGAGAAGAGGCTA
AGCTAAAGGGGGTTAAATTCGGACGAAAGCGCAGAATCAACAGAAAGGAACTACTCGAATTGCATGAACAGGGGATGGGC
GCGACAGAAATAGCCAAAAAAATGAATATAGCTCGTTCAACTATTTATAAAGTCATCAATGAATCACAATAA

Protein sequence : 
MRLFGYARVSTSQQSLDIQIKTLKDAGVKANRIFTDKASGSSADREGLDLLRMKVEEGDVILVKKLDRLGRDTVDMIQLI
KEFDAQGVSIQFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGREEAKLKGVKFGRKRRINRKELLELHEQGMG
ATEIAKKMNIARSTIYKVINESQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 2e-70 81
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 2e-70 81
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 2e-70 81
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 6e-70 81
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 9e-62 80
ABTW07_3873 YP_005797121.1 transposon Tn3 resolvase Not tested AbaR4e Protein 2e-63 79

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpR YP_003560566.1 putative resolvase GU371926.1.gene95.p0 Protein 3e-70 81