Gene Information

Name : yscK (YPZ3_pCD0044)
Accession : YP_003560549.1
Strain :
Genome accession: NC_014017
Putative virulence/resistance : Virulence
Product : type III secretion apparatus component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 41263 - 41892 bp
Length : 630 bp
Strand : +
Note : -

DNA sequence : 
ATGATGGAAAATTATATTACCTCTTTTCAATTGCGCTTCTGCCCCGCGGCTTATTTGCACTTGGAACAGTTACCATCATT
ATGGCGTTCAATATTGCCCTACTTACCTCAGTGGCGCGATAGTGCTCATCTCAATGCTGCTTTATTGGATGAATTTTCTC
TTGATACCGACTATGAAGAGCCCCATGGGCTGGGGGCGCTGCCTTTGCAGCCTCAATCACAGCTCGAACTGTTACTTTGT
CGCCTTGGATTAGTTCTGCATGGGGAGGCGATTCGCCGTTGTGTACTGGCCTCCCCATTACAACAATTATTGACATTGGT
TAATCAAGAAACATTAAGGCAAATTATTGTACAGCATGAGCTGCTAATCGGGCCTTGGCCCACTCACTGGCAGCGCCCGC
TGCCGACAGAAATAGAGAGCCGTACCATGATCCAGTCGGGGCTGGCTTTTTGGTTAGCAGCAATGGAACCCCAACCTCAG
GCATGGTGTAAACGGCTCAGTTTACGCCTCCCATTAGCTACGCCGTCAGAACCTTGGTTAGTGGCCGAGTCACAACGCCC
ACTGGCCCAAACTTTATGTCACAAACTTGTCAAACAGGTTACGCCTACATGCAGCCATTTGTTCAAATAA

Protein sequence : 
MMENYITSFQLRFCPAAYLHLEQLPSLWRSILPYLPQWRDSAHLNAALLDEFSLDTDYEEPHGLGALPLQPQSQLELLLC
RLGLVLHGEAIRRCVLASPLQQLLTLVNQETLRQIIVQHELLIGPWPTHWQRPLPTEIESRTMIQSGLAFWLAAMEPQPQ
AWCKRLSLRLPLATPSEPWLVAESQRPLAQTLCHKLVKQVTPTCSHLFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscK AAO18026.1 LscK Virulence TTSS locus Protein 7e-40 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yscK YP_003560549.1 type III secretion apparatus component VFG0410 Protein 5e-83 100
yscK YP_003560549.1 type III secretion apparatus component VFG0219 Protein 2e-23 41