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Name : yscC (YPZ3_pCD0037) Accession : YP_003560542.1 Strain : Genome accession: NC_014017 Putative virulence/resistance : Virulence Product : type III secretion outer membrane pore YscC Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 35776 - 37614 bp Length : 1839 bp Strand : + Note : - DNA sequence : GTGGAATTAAGTAATATGGCTTTTCCGCTACATTCTTTTTTCAAGCGCGTACTCACCGGGACGTTACTGTTACTTTCTAA CTATAGCTGGGCGCAAGAACTTGATTGGTTGCCTATACCTTATGTTTATGTGGCGAAGGGGGAAAGTTTACGCGATTTAT TAATTGATTTCAGCGCTAATTATGATGCTACAGTGGTAGTAAGCGATAAGATTAATGACAAAGTTTCCGGCCAGTTTGAG CATGATAACCCTCAGGATTTCCTACAGCATATTGCCTCCCTTTACAATTTGGTTTGGTACTATGATGGCAATGTGCTCTA CATTTTTAAAAATAGTGAGGTAGCGTCTCGTCTCATTCGTTTACAGGAAAGTGAGGCCGCAGAGTTAAAGCTGGCATTAC AACGTTCTGGTATATGGGAGCCTCGTTTTGGCTGGCGCCCTGATGCTAGCAACCGCCTTGTTTACGTCTCTGGTCCTCCT CGTTATCTTGAATTGGTTGAACAGACCGCAGCCGCATTGGAACAACAGACGCAAATTCGCAGTGAAAAAACAGGGGCATT AGCGATTGAGATTTTCCCTCTCAAATATGCATCAGCGAGCGATCGAACTATTCATTACCGTGATGACGAAGTGGCTGCTC CTGGGGTTGCAACGATACTTCAACGCGTGTTAAGCGATGCCACAATCCAACAAGTGACAGTGGATAATCAGAGAATACCG CAGGCCGCTACCCGGGCTTCAGCTCAAGCCAAGGTTGAAGCGGATCCATCGCTCAATGCGATAATAGTGCGCGATTCTCC TGAGCGTATGCCAATGTATCAACGGTTAATTCATGCGCTTGATAAACCTAGCGCTCGTATTGAAGTGGCGTTATCCATTG TCGATATAAATGCCGACCAACTTACTGAATTAGGTGTGGACTGGCGAGTTGGCATTCGTACTGGCAACAATCATCAGGTG GTAATAAAAACAACCGGGGATCAAAGTAACATCGCTTCAAACGGTGCATTGGGTAGTTTGATTGATGCTCGCGGGCTTGA CTACCTATTAGCAAGAGTCAATTTACTTGAAAATGAAGGTTCGGCTCAAGTTGTTTCACGTCCGACCCTGCTAACACAAG AAAATGCCCAAGCGGTGATTGATCACCATGAAACCTATTACGTCAAAGTGACAGGTAAAGAAGTGGCTGAACTGAAAGGG ATCACCTACGGCACTATGCTGCGTATGACACCAAGGGTGCTGACTCAAGGAGATAAGTCAGAAATCAGTCTCAATCTACA CATTGAGGATGGGAACCAAAAACCGAATAGTTCAGGGATTGACGGAATCCCCACTATCAGTCGTACGGTCGTTGATACTG TCGCTCGCGTGGGACATGGCCAGAGTTTGATTATTGGTGGTATTTATCGTGACGAATTGAGTGTTGCTCTTAGTAAGGTG CCTTTGCTTGGTGATATTCCTTATCTTGGCGCACTTTTCCGCCGTAAAAGTGAGTTAACTCGCCGTACGGTACGGCTGTT TATCATCGAACCACGGATTATTGACGAAGGTATTGCGCATCATTTAGCGTTAGGTAATGGTCGGGATCTACGTACTGGTA TCTTAGCTGTTGATGAAATATCTAATCAAAGCACTACCTTGAATAAGTTATTAGGTGGCTTCCAGTGTCAGCCTTTAAAC AAAGCGCAAGAAGTGCAGAAATGGCTGAGTCAAAACAATAAATCATCCTATCTTACTCAGTGCAAGATGGACAAAAGTTT GGGATGGCGCGTGGTTGAAGGTGCTTGTACTCCCGCGGAATCATGGTGTGTTTCAGCGCCTAAGCGTGGCGTATTGTGA Protein sequence : MELSNMAFPLHSFFKRVLTGTLLLLSNYSWAQELDWLPIPYVYVAKGESLRDLLIDFSANYDATVVVSDKINDKVSGQFE HDNPQDFLQHIASLYNLVWYYDGNVLYIFKNSEVASRLIRLQESEAAELKLALQRSGIWEPRFGWRPDASNRLVYVSGPP RYLELVEQTAAALEQQTQIRSEKTGALAIEIFPLKYASASDRTIHYRDDEVAAPGVATILQRVLSDATIQQVTVDNQRIP QAATRASAQAKVEADPSLNAIIVRDSPERMPMYQRLIHALDKPSARIEVALSIVDINADQLTELGVDWRVGIRTGNNHQV VIKTTGDQSNIASNGALGSLIDARGLDYLLARVNLLENEGSAQVVSRPTLLTQENAQAVIDHHETYYVKVTGKEVAELKG ITYGTMLRMTPRVLTQGDKSEISLNLHIEDGNQKPNSSGIDGIPTISRTVVDTVARVGHGQSLIIGGIYRDELSVALSKV PLLGDIPYLGALFRRKSELTRRTVRLFIIEPRIIDEGIAHHLALGNGRDLRTGILAVDEISNQSTTLNKLLGGFQCQPLN KAQEVQKWLSQNNKSSYLTQCKMDKSLGWRVVEGACTPAESWCVSAPKRGVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscC | AAO18033.1 | LscC | Virulence | TTSS locus | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yscC | YP_003560542.1 | type III secretion outer membrane pore YscC | VFG0402 | Protein | 0.0 | 100 |
| yscC | YP_003560542.1 | type III secretion outer membrane pore YscC | VFG0211 | Protein | 0.0 | 64 |
