Gene Information

Name : yscO (YPZ3_pCD0028)
Accession : YP_003560533.1
Strain :
Genome accession: NC_014017
Putative virulence/resistance : Virulence
Product : type III secretion apparatus component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 27544 - 28008 bp
Length : 465 bp
Strand : +
Note : -

DNA sequence : 
ATGATACGCCGCCTGCACCGGGTTAAAGTTTTACGCGTTGAACGTGCGGAGAAAGCCATCAAGACTCAGCAAGCTTGCTT
GCAGGCAGCTCATCGACGTCATCAAGAGGCGGTGCAAACCAGTCAGGATTACCATTTGTGGCGTATTGATGAGGAGCAAC
GTCTATTTGATCAGCGAAAAAACACCACACTGAATTGTAAAGATTTGGAGAAATGGCAGCGACAAATAGCGTCGCTACGT
GAAAAGGAGGCCAATTATGAACTGGAGTGCGCCAAATTATTGGAACGTTTAGCCAATGAGCGTGAGCGCCTTACGTTATG
CCAAAAGATGCTGCAACAGGCTCGTCATAAGGAAAATAAGTTTCTCGAGCTAGTGCGACGAGAAGATGAAGATGAGCTAA
ATCAACAACATTATCAGGAAGAACAAGAACAAGAAGAGTTTCTACAGCATCACAGGAACGCCTAA

Protein sequence : 
MIRRLHRVKVLRVERAEKAIKTQQACLQAAHRRHQEAVQTSQDYHLWRIDEEQRLFDQRKNTTLNCKDLEKWQRQIASLR
EKEANYELECAKLLERLANERERLTLCQKMLQQARHKENKFLELVRREDEDELNQQHYQEEQEQEEFLQHHRNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscO AAO18043.1 LscO Virulence TTSS locus Protein 2e-20 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yscO YP_003560533.1 type III secretion apparatus component VFG0391 Protein 3e-43 100