Gene Information

Name : lcrV (YPZ3_pCD0020)
Accession : YP_003560525.1
Strain :
Genome accession: NC_014017
Putative virulence/resistance : Virulence
Product : secreted effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 19977 - 20957 bp
Length : 981 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAGAGCCTACGAACAAAACCCACAACATTTTATTGAGGATCTAGAAAAAGTTAGGGTGGAACAACTTACTGGTCA
TGGTTCTTCAGTTTTAGAAGAATTGGTTCAGTTAGTCAAAGATAAAAATATAGATATTTCCATTAAATATGATCCCAGAA
AAGATTCGGAGGTTTTTGCCAATAGAGTAATTACTGATGATATCGAATTGCTCAAGAAAATCCTAGCTTATTTTCTACCC
GAGGATGCCATTCTTAAAGGCGGTCATTATGACAACCAACTGCAAAATGGCATCAAGCGAGTAAAAGAGTTCCTTGAATC
ATCGCCGAATACACAATGGGAATTGCGGGCGTTCATGGCAGTAATGCATTTCTCTTTAACCGCCGATCGTATCGATGATG
ATATTTTGAAAGTGATTGTTGATTCAATGAATCATCATGGTGATGCCCGTAGCAAGTTGCGTGAAGAATTAGCTGAGCTT
ACCGCCGAATTAAAGATTTATTCAGTTATTCAAGCCGAAATTAATAAGCATCTGTCTAGTAGTGGCACCATAAATATCCA
TGATAAATCCATTAATCTCATGGATAAAAATTTATATGGTTATACAGATGAAGAGATTTTTAAAGCCAGCGCAGAGTACA
AAATTCTCGAGAAAATGCCTCAAACCACCATTCAGGTGGATGGGAGCGAGAAAAAAATAGTCTCGATAAAGGACTTTCTT
GGAAGTGAGAATAAAAGAACCGGGGCGTTGGGTAATCTGAAAAACTCATACTCTTATAATAAAGATAATAATGAATTATC
TCACTTTGCCACCACCTGCTCGGATAAGTCCAGGCCGCTCAACGACTTGGTTAGCCAAAAAACAACTCAGCTGTCTGATA
TTACATCACGTTTTAATTCAGCTATTGAAGCACTGAACCGTTTCATTCAGAAATATGATTCAGTGATGCAACGTCTGCTA
GATGACACGTCTGGTAAATGA

Protein sequence : 
MIRAYEQNPQHFIEDLEKVRVEQLTGHGSSVLEELVQLVKDKNIDISIKYDPRKDSEVFANRVITDDIELLKKILAYFLP
EDAILKGGHYDNQLQNGIKRVKEFLESSPNTQWELRAFMAVMHFSLTADRIDDDILKVIVDSMNHHGDARSKLREELAEL
TAELKIYSVIQAEINKHLSSSGTINIHDKSINLMDKNLYGYTDEEIFKASAEYKILEKMPQTTIQVDGSEKKIVSIKDFL
GSENKRTGALGNLKNSYSYNKDNNELSHFATTCSDKSRPLNDLVSQKTTQLSDITSRFNSAIEALNRFIQKYDSVMQRLL
DDTSGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssV AAO18053.1 LssV Virulence TTSS locus Protein 2e-73 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lcrV YP_003560525.1 secreted effector protein VFG0381 Protein 1e-143 100
lcrV YP_003560525.1 secreted effector protein VFG0201 Protein 7e-39 46