|
Name : YPZ3_pCD0001 (YPZ3_pCD0001) Accession : YP_003560506.1 Strain : Genome accession: NC_014017 Putative virulence/resistance : Unknown Product : integrase core domain protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 378 - 992 bp Length : 615 bp Strand : + Note : - DNA sequence : GTGTACCGGCTTTATCACCTCAGTGGCCTGGGCGTAAAACGCAGAAGGCGTCGGAAAGGGCTGGCAACAGAACGTCTGCC GCTGCTCCGTCCGGCGGCGCCCAATCTGACCTGGTCGATGGATTTCGTCATGGACGCATTGGCCACCGGTCGCAGGATAA AGTGCCTTACCTGCGTGGACGACTACACGAAGGAATGCCTGACGGTCACTGTTGCCTTTGGGATTTCAGGCGTGCAGGTC ACGCGTATTCTGGACAGCATTGCGCTGTTTCGCGGCTATCCGGCGACGATAAGAACTGATCAGGGCCCGGAATTTACCTG CCGCGCGCTCGATCAATGGGCCTTTGAGCATGGCGTGGAACTGCGACTTATCCAGCCCGGCAAGCCGACACAGAACGGAT TTATTGAGAGTTTTAACGGACGCTTTCGCGATGAATGCCTGAATGAGCACTGGTTCAGTGACGTCAGTCATGCCAGGAAA ACCATCAGTGAATGGCGTCAGGATTATAATGAGTGCCGCCCGCACTCTACGCTGAATTATCAGACGCCGTCTGAATTTGC GGCGGCCTGGAGAAAGGGTAATTCTGATAGTGAAGGATCCGACATTACTAAGTGA Protein sequence : MYRLYHLSGLGVKRRRRRKGLATERLPLLRPAAPNLTWSMDFVMDALATGRRIKCLTCVDDYTKECLTVTVAFGISGVQV TRILDSIALFRGYPATIRTDQGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDVSHARK TISEWRQDYNECRPHSTLNYQTPSEFAAAWRKGNSDSEGSDITK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAB46578.1 | IS1222-like transposase | Not tested | HPI | Protein | 5e-73 | 98 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 1e-55 | 68 |
| RS13 | AAP82958.1 | putative transposase | Not tested | PAPI-2 | Protein | 4e-42 | 62 |
