Gene Information

Name : sycT (YPZ3_pCD0012)
Accession : YP_003560517.1
Strain :
Genome accession: NC_014017
Putative virulence/resistance : Virulence
Product : YopT chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 11620 - 12018 bp
Length : 399 bp
Strand : +
Note : -

DNA sequence :
ATGCAGACAACCTTCACAGAACTTATGCAACAGCTTTTCCTGAAGCTTGGCTTGAACCATCAAGTTAATGAAAATGACGT
TTATACATTTACATTTGAAGTGGATGGGCACATCCAAGTACTGATTGCTTGTTATCATCAACAATGGGTACAGTTGTTCA
GTGAGCTAGGTGCTGATTTGCCAACCAACGATAATTTGTTTGGCGAACATTGGCCTGCCCATGTTCAAGGAAGACTGGAC
GGTAAACCTATTCTCTGGTCTCAACAATCACTGGTAGGGTTGGATATCGATGAAATGCAGGCTTGGTTAGAACGTTTCAT
TGATGATATTGAGCAGAGAAAAGAACCGCAAAATACTAAGTTTCAGCCCAACTCGACATCACCCATATTATTCATCTGA

Protein sequence :
MQTTFTELMQQLFLKLGLNHQVNENDVYTFTFEVDGHIQVLIACYHQQWVQLFSELGADLPTNDNLFGEHWPAHVQGRLD
GKPILWSQQSLVGLDIDEMQAWLERFIDDIEQRKEPQNTKFQPNSTSPILFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18077.1 unknown Not tested TTSS locus Protein 2e-33 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sycT YP_003560517.1 YopT chaperone VFG0376 Protein 4e-58 100