|
Name : tnpA (SJA_C2-04440) Accession : YP_003559539.1 Strain : Genome accession: NC_014013 Putative virulence/resistance : Unknown Product : Tn3-family transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4644 EC number : - Position : 532609 - 535566 bp Length : 2958 bp Strand : + Note : transposase or inactivated derivative, TnpA family DNA sequence : TTGGCGAGACGGCGACTGGTGAGCGCGGAAATCTGGGCAGGGCATTATGGCGCGCCGCTCGATGAGCGCGAGATTGCGCG GCACTATACGCTGACCGGTGACGACCTGGAAATTGTCGGCCGCCGTCGCGGCGATGCCACCCGGCTCGGCTACGCGATGC TCCTACTCTATATGAGATGGCCTGGCCGTGCGCTGGAAGCGGGTGAAGTCCCGCCCGCTCCTGTGCTCGCCTATGTGGCG CAGCAACTCGGCGTCGCGCCCGAAGCCTTCGCGGACTATGCCCATCGGGACCAGACCCGTCGCGAACATCTCGTTGAAAT CCGACGATCGCACGGGTTCAGGATTTTCGACCGCAAGGCTTTCCACGAAGTTGTCGCATTCTCGATCCCGATCGCACAGA CCATCGTCCACCCCGGCCAGATGGCGGGGGTCATCGTTGACGAACTTCGGCGCCGGCAGATCCTCCTGCCTTCTTCATCG GTTCTCGAAGCGGTACTCCGGCGTGCTCGCCAGCAGGCCGAACAGCTTACCTATGAAGTGCTCACGAACGGCCTGCGGCC CGATACGCTGCAGGGGCTGGACGATCTGCTGGCCCGACGAACAGGGCAAGCCGCGACATGGCTATCCTGGCTGCGCAATG CACCACAGTCGCCGGCAGCGCGCAACATCCTACGCCTGATCGAACGGCTCACTCATATCCGCGCGCTGGATCTCGATCGC GCCCGTGCCGACATGATCCCGGCTTTGACTTTTGACAGGCTGGCGGACGAAGGCAGCCGGATCACACCCCAGCACCTTGG CGAACTCAATGCCCTGCGCCGCCATGCGACGCTGGCGGCGCAGGGCATCCGTCTTGAGGAAAGCCTGACCGATGCCACCC TGACGATGTTCGACAAGCTGTTGGGCAGCATGTCGCGTCGCGCCGAGAACCGGACCCGTGACAAAGCCCTCAAGACGGTG CGCGAGTTGCAAGGCCATCTCCGGACGCTCACAGGGTCTTGCCGCATTCTCATCGAAGCGCGCACCAACGGTGTGGACTC TCTGGCGCAGATCGAGGCGCTGGATTGGCAGCGCTTCGCCGTGGCGGTCGCGCGGGCCGAAGTACTCGGGCGACCGGAAA CCGTCGATCGCACCGCTGAATTGATCGAGCGGCATCGCACGGTGAAGCTCTTTGCCGGTGCCTTTCTCAACACCTTCGAA TTTCGCGGCGCCGGTGCGGTGCAGGGACTCCTGTCGGCGCTTACCATCATCGCGGAGCTATACCGGACCGGCAAACGGCG CTTGCCTGATCGCGTGCCGCTGCGCTTTGTGCCCTCCGCATGGCGGCCGTTCGTCCTGCGGGACGGCATCGTCGATCGCG CCGCCTATGAACTATGCGCCTTGTCCCAGCTACGGGAGCGGTTGCGAGCGGGAGACATATGGGTCTCGGGAAGCCGCCAG TTCCGCGATTTCGATAGCTACCTCATCCCGCCGGCCACCTTCGACGCGCTTCGCGAGAAGGGGCCGTTGCCGCTCGCCAT CGAAACGGACTTCGATCGTCATATCGAGGAAAGGCGCGCCAGGCTCGACACGGCGATCGAACAGGTGACGGTCCTCGCCC GACAGGGCGAGCTGCCCCAGGTCAGGCTTGACGAAAGCGGCCTTATCATCTCGCCGCTGAAAGCGGCAACGCCACCCGCC ACCGAGATTGCCCGTCGCGCTGCCTATGACCGACTGCCGCGCGTGAAGATCACCGATCTCCTGCTTGAGGTCGATGCCTG GACCGGGTTCAGCGAATGCTTCATCCATCGGCGTTCGGGCCGGGAGGCCGACGACCGCAATGCGCTGCTCACCGTCATCC TTGCCGATGGCATCAATCTCGGCCTCACACGCATGGCGGAAACCTGCCGAGGCGCAAGCCTGCGCCAGCTCGCCCATCTC CACGACTGGCACATCAGCGAGGCCGCCTATGGTGAAGCGCTGGGAAGGCTGATCGACGCCCATCGCGCCATGCCGCTCGC CGCGCTGTGGGGAGACGGCACCACCTCGTCGAGCGACGGACAGCAATTCCATGCCGGGGGCCGTGGCGCCGCAATCGGCG ACATCAACGCGCGCAGCGGCAACGAACCGGGCGTTGCCTTCTACACCCATGTCTCGGATCGATATGACCCCTTCGCGACC CGGGTAATCGCGGCGACCGCCGGCGAAGCTCCCTATGTGCTGGATGGCTTGCTGTATCAGCAGACCGGCCTGACAATCGA GGAGCACTACACCGATACAGGCGGTGCATCGGACCATGTGTTCGGCCTTATGCCCTTCTTCGGCTACCGCTTCGCGCCGC GCCTGCGCGACATCAAGCAGCGTCGTTTGCACCTCCTTCCCGGCCAGGAAGCCGGCCCCTTGCTTGCCGGCATGACGGCC GAACCGATCGCATTGGGTCATGTCGCGGCGCATTGGGATGAACTGCTGCGGTTCGCCACATCGATACGCACCGGCACCGC CACCGCTTCGGCGATGCTTCGCCGCCTGTCCGCCTATCCGCGACAGAACGGACTGGCCCTCGCGATGCGCGAGCTGGGCC GCCTCGAACGCTCGATCTTCATGCTCGACTGGCTGCGCGACATTGATCTGCGCCGGCGTACCCAGGCGGGCCTCAACAAG GGCGAGGCCCGCAACGCGCTCGCACGCGCGCTCTTCTTCAACCAGCTCGGCGAATTGCGTGATCGGCGGTTCGAGAACCA GACCTATCGCGCCTCCGGCCTCAACCTGCTCGTCGCCGCCATCATCCTGTGGAACACCCGCTATCTCGAAGTGGCGCTGG CTGATATCGGCACGCCCGACGAAATCGCACGTCACGTCGCGCCATTGGGCTGGGAACATATCTCGCTCACCGGCGACTAT AGCTGGAATGTTGAAGATCGGCCCGATCCGGATGTCCTGCGGCCACTGCGCGCCATCAGTTCGTTGCTCGCCGCGTAA Protein sequence : MARRRLVSAEIWAGHYGAPLDEREIARHYTLTGDDLEIVGRRRGDATRLGYAMLLLYMRWPGRALEAGEVPPAPVLAYVA QQLGVAPEAFADYAHRDQTRREHLVEIRRSHGFRIFDRKAFHEVVAFSIPIAQTIVHPGQMAGVIVDELRRRQILLPSSS VLEAVLRRARQQAEQLTYEVLTNGLRPDTLQGLDDLLARRTGQAATWLSWLRNAPQSPAARNILRLIERLTHIRALDLDR ARADMIPALTFDRLADEGSRITPQHLGELNALRRHATLAAQGIRLEESLTDATLTMFDKLLGSMSRRAENRTRDKALKTV RELQGHLRTLTGSCRILIEARTNGVDSLAQIEALDWQRFAVAVARAEVLGRPETVDRTAELIERHRTVKLFAGAFLNTFE FRGAGAVQGLLSALTIIAELYRTGKRRLPDRVPLRFVPSAWRPFVLRDGIVDRAAYELCALSQLRERLRAGDIWVSGSRQ FRDFDSYLIPPATFDALREKGPLPLAIETDFDRHIEERRARLDTAIEQVTVLARQGELPQVRLDESGLIISPLKAATPPA TEIARRAAYDRLPRVKITDLLLEVDAWTGFSECFIHRRSGREADDRNALLTVILADGINLGLTRMAETCRGASLRQLAHL HDWHISEAAYGEALGRLIDAHRAMPLAALWGDGTTSSSDGQQFHAGGRGAAIGDINARSGNEPGVAFYTHVSDRYDPFAT RVIAATAGEAPYVLDGLLYQQTGLTIEEHYTDTGGASDHVFGLMPFFGYRFAPRLRDIKQRRLHLLPGQEAGPLLAGMTA EPIALGHVAAHWDELLRFATSIRTGTATASAMLRRLSAYPRQNGLALAMRELGRLERSIFMLDWLRDIDLRRRTQAGLNK GEARNALARALFFNQLGELRDRRFENQTYRASGLNLLVAAIILWNTRYLEVALADIGTPDEIARHVAPLGWEHISLTGDY SWNVEDRPDPDVLRPLRAISSLLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | ACY75538.1 | TnpA | Not tested | Tn6060 | Protein | 0.0 | 45 |
| EXA24 | ABD94633.1 | truncated Tn1721 tranposase | Not tested | ExoU island A | Protein | 0.0 | 45 |
| tnpA | ACF06153.1 | transposase | Not tested | Tn5036-like | Protein | 0.0 | 44 |
| EC042_4089 | YP_006098372.1 | transposase | Not tested | Tn2411 | Protein | 0.0 | 44 |
| tnpA | AAL08440.1 | transposase TnpA | Not tested | SRL | Protein | 0.0 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tnpA | YP_003559539.1 | Tn3-family transposase | VFG1031 | Protein | 0.0 | 43 |
