Gene Information

Name : pepA-1 (SVI_0838)
Accession : YP_003555587.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Unknown
Product : cytosol aminopeptidase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0260
EC number : -
Position : 972247 - 973755 bp
Length : 1509 bp
Strand : -
Note : -

DNA sequence :
ATGGAGTTTAGCGTTAAGAGCGGTAGTCCGGAAAAACAGCGTTCGGCCTGCATAGTAGTTGGTGTATATGAACCAAGACG
TTTATCGGGGATTGCTGAGCAACTTGATAAAATTAGTGAAGGCTATATCAGCAACCTACTTCGTCGTGGGGATCTCGAAG
GCAAGCCAGGGCAGATGCTTCTTTTACATCATGTGCCTAACGTTCTCAGCGAACGCGTGCTTTTGGTTGGTTGTGGTAAA
GAACGTGAGCTCGATGAACGTCAATACAAGCAGATCATCAACAAAACTATCACTACGCTTAACGAGACTGGTTCAATGGA
AGCCGTTTGCTTCCTGACAGAATTGCACGTGAAGGGTCGTGATACTTACTGGAAAGTTCGTGAAGCCGTTGAAACAACAC
AGAACAGCCTTTACAGTTTCGATGCACTGAAAACTAACAAGGGTGAGACGCGCCGTCCGCTACGCAAGCTAGTATTCAAT
GTACCGACACGCCGTGAATTGACTGTAGGTGAGCGCGCAATCGAACATGGTATGGCCGTATCTGCTGGTATGCATCTTTG
TCGCGACGTTGCCAACATGCCGCCTAACATCTGTAATCCTGCCTACCTGGCATCACAAGCTCGCCAAATGGGTGAGACCT
GTGAAGAGCTAACTGTGACCACCTTAGGTGAAGAGCAGATGACCAAGCTGGGTATGAACTCATACGTTGCAGTAGGCCGT
GGCAGTGCCAACGAATCTATCATGACAGTGATGGACTACAAGGGCGCAGTCGACAGCACTCAGAAGCCAATTGTCCTAAT
CGGTAAAGGTCTGACATTTGACTCAGGTGGTATCTCACTTAAGCCTGGCGAAGCCATGGATGAGATGAAATACGACATGG
GCGGAGCCGCTGGTGTTATCGGTGTCATGAAAGCCCTTTGTAACCTCAATCTTAAAATCAACGTGATAGGTATTCTTGCT
GGCTGTGAAAACATGCCATCGAGCAATGCTTACCGTCCGGGTGATATCCTCACCACTATGTCGGGCCAAACTGTCGAAGT
GTTAAACACAGACGCAGAAGGTCGCCTGGTATTGTGTGATGTATTGACCTACGTCGAGCGTTTCGACCCTGAGTTAGTTG
TCGATACAGCAACTCTGACAGGTGCCTGTGTTATCGCACTGGGTAAACACGCTTCGGGTCTATTCTCTGGTCATAACCCT
CTAGCACACGAGCTATTAAATGCCGGTGAGCAGAGTGGAGATCGCGCATGGCGCTTGCCGCTGTGGGATGAGTATCAAGA
GCATCTTGAAAGCCCATTTGCCGATATGACTAACCTTGGCGGTCGTCCCGCTGGTGCAATCACGGCAGCTTGCTTCCTGT
CTCGCTTCACCAAGAAGTACAACTGGGCACACTTAGATGTGGCCGGTACTGCTTGGAACAGTGGCGCGAACAAGGGCTCT
ACCGGTCGTCCTGTACCGCTATTGACTCAGTTCCTGATCAACCGAGCGGGTGTTCCTCAAGGGGAATAA

Protein sequence :
MEFSVKSGSPEKQRSACIVVGVYEPRRLSGIAEQLDKISEGYISNLLRRGDLEGKPGQMLLLHHVPNVLSERVLLVGCGK
ERELDERQYKQIINKTITTLNETGSMEAVCFLTELHVKGRDTYWKVREAVETTQNSLYSFDALKTNKGETRRPLRKLVFN
VPTRRELTVGERAIEHGMAVSAGMHLCRDVANMPPNICNPAYLASQARQMGETCEELTVTTLGEEQMTKLGMNSYVAVGR
GSANESIMTVMDYKGAVDSTQKPIVLIGKGLTFDSGGISLKPGEAMDEMKYDMGGAAGVIGVMKALCNLNLKINVIGILA
GCENMPSSNAYRPGDILTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFDPELVVDTATLTGACVIALGKHASGLFSGHNP
LAHELLNAGEQSGDRAWRLPLWDEYQEHLESPFADMTNLGGRPAGAITAACFLSRFTKKYNWAHLDVAGTAWNSGANKGS
TGRPVPLLTQFLINRAGVPQGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00295 YP_008207760.1 Leucyl aminopeptidase Not tested AbaR25 Protein 1e-93 57
BJAB0868_00299 YP_008211625.1 Leucyl aminopeptidase Not tested AbaR26 Protein 1e-93 57