Gene Information

Name : kpsT (SVI_0614)
Accession : YP_003555363.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Virulence
Product : polysialic acid transport ATP-binding protein KpsT
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 731342 - 732007 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGATCCATTTCGAAGGGGTAAATAAGTATTACCCGACTAAACAGGGGCGTCACTATGTGTTTAAAGATCTAAACATCAG
TCTGCCTACAGACCGAAATGTAGCTATATTAGGTCCGAACGGCGTGGGTAAATCGACCTTAATTCGCATGATGGGCGGCG
CGGATATGCCAAATTCTGGCCGCATACATTCGGAGAAAAATATCTCCTGGCCACTAGGGCTACAAGGGGGGCTACAAGGC
TCTATGACAGCCCGAGAGAATGTACGTTTCGTGGCGCGAATACATGGCTACAAAAACACTAAGCCTATAGAGCAACAGGT
GCAAGATTTTGCCGAAATTGGCAAGTTTTTCGATGAACCGGTAAAGACTTATTCCAGTGGCATGCGCTCGCGTATCACTT
TTGGTCTCACCATGGGCTTCGATTTTGACTTCGATGTGCTGCTTATTGATGAGCTGGGGGCTGTGGGTGATGCCAACTTT
CGCAAGAAGAGTGAACAAATGCTGCTGGATAAGTATGACAAGACCAAGTTGATCATGGTGAATCACTCCATTGTCGGGCT
GAAAAAGTTTTGTGATTCTGGGGTGGTCATTAAAAACCAAGGTTTATATTTTTTTGAAAATGTGGATGATGCTATACAGG
AATACCAAGAGGTTTACGTCAAATAA

Protein sequence : 
MIHFEGVNKYYPTKQGRHYVFKDLNISLPTDRNVAILGPNGVGKSTLIRMMGGADMPNSGRIHSEKNISWPLGLQGGLQG
SMTARENVRFVARIHGYKNTKPIEQQVQDFAEIGKFFDEPVKTYSSGMRSRITFGLTMGFDFDFDVLLIDELGAVGDANF
RKKSEQMLLDKYDKTKLIMVNHSIVGLKKFCDSGVVIKNQGLYFFENVDDAIQEYQEVYVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 7e-51 51
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 6e-50 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_003555363.1 polysialic acid transport ATP-binding protein KpsT VFG1449 Protein 3e-51 51
kpsT YP_003555363.1 polysialic acid transport ATP-binding protein KpsT VFG0696 Protein 2e-39 41