Gene Information

Name : alr (SVI_0450)
Accession : YP_003555199.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : -
Position : 516573 - 517649 bp
Length : 1077 bp
Strand : +
Note : -

DNA sequence :
TTGAAGCCATTTCCCCGTGCAGAGATCAGCTGTAAAGCGCTGAAGAATAATCTAGCCCGCCTGCGACAGATCGCGCCTGC
GAGTAAAATCATGGCGGTCGTTAAAGCGAATGGTTATGGCCACGGCTTATTGAACGTAGCTAAATGCATCGAAGATGCTG
ATGGGTTCGGCTTGGCTCGTTTAGAAGAGGCAATAGCATTAAGAGATGGCGGCGTGACATCTAAGCTCATTTTGCTGGAA
GGCTTCTTTAGGCCGGTAGACTTGACCACCTTAGTGATGAAGGACATAGAGACAGTTGTTCATAACGAGAAACAGCTGGA
GATGTTAGAGCAGGCAAGCTTATCTAAGCCTGCTAACGTCTGGTTAAAGTTAGATACTGGTATGCATAGGTTAGGTTTTA
CCCCCGAGCAATTTGAGCATGTGTATGCGCGACTGCTGGATTGTCCTCAAGTGGCCAAACCAATCAAAATAATGTCTCAT
TTTGCCTGTGCCGACGAGCCGGATAACCCTTATACTCGAGAGCAGCTAAATATATTCAATCGTTTGGCAAAAAACTTACC
AGGCGAGACTACGTTAGCTAACTCGGCAGGAACATTATATTGGCCAGATAGTCATAAAGACTGGGTTCGCCCGGGGATTT
CCCTTTATGGTGTCTCCCCTGTAGTGGGGGATTTAGGTAAGAATCATGGTCTGCAACCGGCAATGGAGCTGATATCTCAG
CTTATCGCCATTCGAGAGCATAAGGCTGGTGATCCTGCTGGCTATGGCTGTTATTGGCGGGCCAAAGAAGAGACTAAGCT
TGGCGTCGTCGCCATCGGCTATGGTGATGGATATCCAAGAAATGCACCAGAGGGAACTCCGGTGTGGGTTAATGGACGTC
TGGTACCCATAGTTGGACGTGTTTCTATGGATATGTTGACGGTTGATCTCGGATTGGACTCTACCGACAGTATTGGTGAT
GAGGCCATAATGTGGGGCAGTGCCTTACCGGTTGAAGTGGTTGCCGAGCATATAGGCACTATTGCCTATGAACTAGTGAC
AAAATTAACTCCTCGTGTTGCCGTGTGCATGGAATAA

Protein sequence :
MKPFPRAEISCKALKNNLARLRQIAPASKIMAVVKANGYGHGLLNVAKCIEDADGFGLARLEEAIALRDGGVTSKLILLE
GFFRPVDLTTLVMKDIETVVHNEKQLEMLEQASLSKPANVWLKLDTGMHRLGFTPEQFEHVYARLLDCPQVAKPIKIMSH
FACADEPDNPYTREQLNIFNRLAKNLPGETTLANSAGTLYWPDSHKDWVRPGISLYGVSPVVGDLGKNHGLQPAMELISQ
LIAIREHKAGDPAGYGCYWRAKEETKLGVVAIGYGDGYPRNAPEGTPVWVNGRLVPIVGRVSMDMLTVDLGLDSTDSIGD
EAIMWGSALPVEVVAEHIGTIAYELVTKLTPRVAVCME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 9e-57 43