Gene Information

Name : gspG (SVI_4198)
Accession : YP_003558947.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 4801363 - 4801797 bp
Length : 435 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATAAGAAATAAGCAGCAAGGTTTCACCCTACTGGAAGTCATGGTAGTTATCGTAATCTTAGGGATTCTAGCTTC
TATGGTTGTTCCTAACCTGATGGGAAACAAGGATAAGGCCGATCAGCAAAAAGCAGTTTCCGATATCGTAGCCTTAGAAA
ATGCCTTAGACATGTATCGTTTGGATAACAGCATCTATCCAACGACCGAGCAGGGTCTGGATGCCTTGGTACAAAAACCT
AATAGCTCACCTGAGCCGCGTAATTATCGTGAAGATGGTTATGTGAAACGTTTACCACAAGATCCATGGAGAAATGATTA
CTTGTTACTGAGCCCGGGCGAAAATGGCAAGCTGGATATCTTCAGCACAGGTCCAGATGGTCAAGCCGGCACAGAAGATG
ATATCGGTAACTGGAATCTACATAATTTCCAGTAA

Protein sequence :
MKIRNKQQGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYRLDNSIYPTTEQGLDALVQKP
NSSPEPRNYREDGYVKRLPQDPWRNDYLLLSPGENGKLDIFSTGPDGQAGTEDDIGNWNLHNFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-45 68
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-45 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_003558947.1 general secretion pathway protein G VFG2050 Protein 5e-46 68
gspG YP_003558947.1 general secretion pathway protein G VFG1871 Protein 3e-34 54
gspG YP_003558947.1 general secretion pathway protein G VFG0180 Protein 5e-34 54