Gene Information

Name : argH (SVI_4014)
Accession : YP_003558763.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 4589672 - 4591036 bp
Length : 1365 bp
Strand : -
Note : -

DNA sequence :
ATGGCATTATGGGGCGGAAGATTTAGTCAGGAAAGCAGTGCACTGTTTAAGTTATTTAACGATTCACTGCCTGTGGATTA
CCGTTTGATTGAGCAGGACATCTTAGGTTCGATAGCTTGGGCCGGCGCTATCACACAGGTCGGCGTCTTGACTCAGGATG
AGTGCACTGAGTTACAGCAGGCGTTGAAAGATCTATTAGTCGAGGTTGAAAATAAGCCAGAGTTGATCTTAGCATCGGGC
GCCGAAGATATTCATAGCTTCGTAGAGCAGTCACTTATTGCCAAAGTAGGCGATCTGGGCAAGAAACTACATACAGGGCG
TTCTCGTAACGATCAGGTGGCTACGGATCTTAAGCTATGGTGCAAGAAGGAGGGTCAACAGCAGCTTGTGTTATTAAAGG
GCTTGAGACAAGCACTTCTCGAACTGGCCCAAAGAGAGCTAGATGCTGTTATGCCTGGTTATACGCATCTTCAGCGTGCT
CAGCCCATTGTATTTGGTCACTGGTGTCTAGCTTATGTAGAGATGTTTGAGCGTGATATTAGCCGCTTAGAAGATGCACT
CAAGCGGGCCGATACCTGTCCTCTAGGAACCGGGGCACTTGCTGGTACAGCTTATCCCATGGATAGATATAAGCTAGCAG
AAGCATTAGGTTTCGCATCTCCGACCCTTAATAGCTTAGATTCGGTCTCCGACAGAGATCATGTGATTGAGATCTGTAGC
GATGCTTCAATCAGTATGATGCACCTTAGTCGCATGGCAGAAGATCTTATCTTCTTCAACAGTGGTGAAGCTGGCTTTAT
CGACTTAGATGACGAAGTGACCTCGGGCTCATCTTTGATGCCACAGAAAAAGAATCCCGATGCGCTAGAACTAATTCGTG
GCAAGACTGGGCGTGTTTACGGTAGCCTGATTGGCATTCTTACGACAATGAAGGCACTTCCTCTGGCCTATAACAAGGAT
ATGCAGGAAGACAAGGAGGGGCTGTTTGATGTTATGGATAGCTGGGCTATCTGTCTCGAGATGGCGGCACTCGTCTTGAG
TGGTCTCAAGGTTAATCGAGAGAATACCCTAAGAGCCGCACAACAAGGTTATGCAAACTCGACCGAACTAGCCGATTACT
TAGTCGCTAAGGGGATGCCATTTAGAGAGGCGCATCATGTAGTGGGTGAAGTGGTGGTTAAAGCCATAGAGCTAAAGAAA
CCCTTGGAGGATTTTGCATTAGAGGAGTTACAAGCCTTCTCTAATATTATAGCCGCTGATGTGTATGCTTGTTTGACCAT
AGAATCTTGTCTGGCAAAGAGAGAAGCCCTTGGTGGCACTTCGCTGCATCAGGTGAAAGCGGCACTGGCTTGTAAATTAG
CTTGA

Protein sequence :
MALWGGRFSQESSALFKLFNDSLPVDYRLIEQDILGSIAWAGAITQVGVLTQDECTELQQALKDLLVEVENKPELILASG
AEDIHSFVEQSLIAKVGDLGKKLHTGRSRNDQVATDLKLWCKKEGQQQLVLLKGLRQALLELAQRELDAVMPGYTHLQRA
QPIVFGHWCLAYVEMFERDISRLEDALKRADTCPLGTGALAGTAYPMDRYKLAEALGFASPTLNSLDSVSDRDHVIEICS
DASISMMHLSRMAEDLIFFNSGEAGFIDLDDEVTSGSSLMPQKKNPDALELIRGKTGRVYGSLIGILTTMKALPLAYNKD
MQEDKEGLFDVMDSWAICLEMAALVLSGLKVNRENTLRAAQQGYANSTELADYLVAKGMPFREAHHVVGEVVVKAIELKK
PLEDFALEELQAFSNIIAADVYACLTIESCLAKREALGGTSLHQVKAALACKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 9e-94 48
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 9e-94 48