Gene Information

Name : SVI_3671 (SVI_3671)
Accession : YP_003558420.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4155529 - 4156197 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGACAGAACAGATAGTTCAACTGCAAGGGATCACTAAAGAGTTTATCGATGGAGGGGTCTCTCACAGGGTCCTCGACCG
ACTCGACCTGCTGCTCACCCAAGGTGACACCATAGCGCTCACTGGTGCCAGCGGCAGTGGCAAGAGCACCTTGCTTAATC
TGATCGCCGGATTCGAACGTCCCGATGCGGGCTCCCTCAGCCTGCTGAGCGAAATCACCACATCATGGAGCGATAATCTC
TGGAGTCATTTTAGGCGAGTTTCATTAGGCGTGGTGTTTCAACAATTTAACCTGCTGACCCCGCTTAACGTCGAAGATAA
TATTGCATTCCCACTCAGACTCAACGGCTTAGATTGGAACTCTTGGTGCGATCATCTGGTCGATAGTTTAGGTCTTAGAC
CCTTACTAAAGCGCCATGTAGAAACCTTATCCGGTGGTCAACAGCAGCGAGTCGCCATCGCACGGGCACTGGCCCATAAA
CCTAGACTCTTGTTAGCCGATGAGCCCACCGGCAACTTAGATCAACTCGCCAGTTTAGAGGTGATGAAGCTCTTGTGTGA
ACTGGCCGCAGAGCAGGACACCAGTATTATTATGGTCACCCACAGCATGGAATGCGCCCAGTTTATGCAGCGGCGCTGGC
ATCTGAATAATGGCCAAATACATGAGTGA

Protein sequence : 
MTEQIVQLQGITKEFIDGGVSHRVLDRLDLLLTQGDTIALTGASGSGKSTLLNLIAGFERPDAGSLSLLSEITTSWSDNL
WSHFRRVSLGVVFQQFNLLTPLNVEDNIAFPLRLNGLDWNSWCDHLVDSLGLRPLLKRHVETLSGGQQQRVAIARALAHK
PRLLLADEPTGNLDQLASLEVMKLLCELAAEQDTSIIMVTHSMECAQFMQRRWHLNNGQIHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVI_3671 YP_003558420.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-29 41