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Name : gabD (SVI_3642) Accession : YP_003558391.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 4122523 - 4123980 bp Length : 1458 bp Strand : - Note : - DNA sequence : ATGCAACAAGTTAACGATTCAGGATTAGTGAAGTTAAGCTCTTATATAGATGGACGCTGGAGTGACAGCTCGGAGCGGTT CGATGTCATTAATCCTGCTAATGACAGGGTAGTGGCTCAGGTATGCAACGCAGGTATAGCCGAGACTGAAGCGGCTGTTG TTGCCGCTAAGAAAGCCTTACCTGCTTGGTCTAAAAAATCGGCCAACGAGCGTGCGGTCATTTTGCGTAGCTGGTTTAAC TTGATGATGGAGAGTCAGGATGATCTAAGTCGCATCTTGACCTTAGAGCAAGGTAAGCCCTTAGCCGAAGCTAAAGGGGA GATAGCTTACGGTGCGGCCTTTATCGATTGGTTTGCCGAAGAGGGCAAACGAGTTTATGGTGATATTATTCCTTCGCCTA CAGGTGATAAGCGGATTATCGTTATTAAGCAGCCTGTAGGAGTTGTCGCTGCTATCACGCCGTGGAACTTTCCTAATGCC ATGATCGCCCGCAAAGCGGCTGCTGCTCTGGCTGCAGGTTGTACCTTCGTGGTGCGGCCTTCACCCTCTACGCCTTTGTC TGCACTGGCTATGGCCGAACTTGCCGAGCGTGCAGGCGTGCCAGCCGGTGTGTTCAACGTGGTTGTCGGCTTAGATTCAT CTGGTATGGGCAAGGTGCTGACTCAGCATCCGGATGTGTCTAAATTCAGCTTCACCGGCTCAACAGCGGTTGGCAAAATA TTGATGAATCAAACGGCCACAAGCGTAAAGAAGGTGTCGATGGAGCTCGGCGGTAACGCCCCCTTTATCGTATTCGATGA CGCCGATATCTATGAGGCAGTCCAAGGCGCACTCATCTCTAAATATCGTAATGCAGGCCAGACCTGTGTCTGTACTAACC GTGTTTTAGTTCAGCGTAGTGTGGTTCAGGAGTTCACCGATAAATTTGCCAGTGCGGTGGCTGAGATTAAGATTGGCAAT GGCTTAGCCGCTGGTGTCAACTTAGGCCCAATGATCACATCAGAAGCGGTCGATGGCGTGCATAAGTTAGTGGAAGAAAC TGTCGCTGCAGGGGCAAAAATTATTGCCGGAGGCAAGCGCAGCGCTGCGGGTAACAACTTCTATGAGCCGACAATTCTGA CTGGGGTCACTAATGATATGCCCTTGGCTAGCAATGAGATTTTTGGCCCAGTAACGCCTATCATCAGCTTCGATACCGAA GAGGAAGCCATTAAAATTGCCAACGATACAGAATATGGCTTAGCAGCCTACTTCTATTCCCGGGATATTGGTCGAGTGTG GCGTGTGGCTGAAGGATTGGAGTTCGGCATGGTGGGTATCAACGAAGGCATCATTGCTAATCCGGCGGCGCCATTTGGTG GTATCAAGCAATCGGGTAATGGCCGTGAAGGTTCTAAGTATGGACTCGATGACTATATGGAAATCAAATATATCTGCATG GGTGGTCTAAATAGCTAA Protein sequence : MQQVNDSGLVKLSSYIDGRWSDSSERFDVINPANDRVVAQVCNAGIAETEAAVVAAKKALPAWSKKSANERAVILRSWFN LMMESQDDLSRILTLEQGKPLAEAKGEIAYGAAFIDWFAEEGKRVYGDIIPSPTGDKRIIVIKQPVGVVAAITPWNFPNA MIARKAAAALAAGCTFVVRPSPSTPLSALAMAELAERAGVPAGVFNVVVGLDSSGMGKVLTQHPDVSKFSFTGSTAVGKI LMNQTATSVKKVSMELGGNAPFIVFDDADIYEAVQGALISKYRNAGQTCVCTNRVLVQRSVVQEFTDKFASAVAEIKIGN GLAAGVNLGPMITSEAVDGVHKLVEETVAAGAKIIAGGKRSAAGNNFYEPTILTGVTNDMPLASNEIFGPVTPIISFDTE EEAIKIANDTEYGLAAYFYSRDIGRVWRVAEGLEFGMVGINEGIIANPAAPFGGIKQSGNGREGSKYGLDDYMEIKYICM GGLNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-131 | 59 |
