Gene Information

Name : SVI_3380 (SVI_3380)
Accession : YP_003558129.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Unknown
Product : site-specific recombinase, phage integrase family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4973
EC number : -
Position : 3828010 - 3828606 bp
Length : 597 bp
Strand : -
Note : -

DNA sequence :
ATGAGAAAGTTATCTTCAGGAAAATGTAGTGGCATAAAAAGGCCATTCAAACTAGAAGAAATATGGCGAATAAGAACTCG
ACTTGAGATTGAGAGTAATTTGATGCAGCTTGCATTACTCAATCTAGCCATTGATAGCAAGTTAAGAGCGAGTGATTTAC
TCAAACTGCACGTATACGATGTTTTTTCGCAAGGTGTGGTCTATGAAAGAGTTCTATGCATACAGCAAAAAACAGCTACT
AGCGTTCATTATGAGATCACTCCCAAAACCCAACAAAGTATTAGTAGGTGGATTTATTCGGCTTCTTTAGAGGCCAATAG
TTTTTTATTTCCAAGTTATCGTCGCAAAGGACAATCTATCAGCTATTCCTTTTACCGTTCGATTATCAGGGATTGGGCTG
TCAAACTTGGATTGAATGCAGACTGTTATGGAACTCATACCATGCGTCGCACCAAAGCCACTCTAATCTATGCCAGAACG
AAAAACATTCGGGCGGTACAGATTCTACTGGGGCATTCGAAGCTAGATAACACCATTCGTTACCTTGGCGTTGAACTGGA
AGATGCTTTGAGGCTCTCAGAGCAAACGGATTGCTAG

Protein sequence :
MRKLSSGKCSGIKRPFKLEEIWRIRTRLEIESNLMQLALLNLAIDSKLRASDLLKLHVYDVFSQGVVYERVLCIQQKTAT
SVHYEITPKTQQSISRWIYSASLEANSFLFPSYRRKGQSISYSFYRSIIRDWAVKLGLNADCYGTHTMRRTKATLIYART
KNIRAVQILLGHSKLDNTIRYLGVELEDALRLSEQTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67363.1 putative recombinase Not tested PAI II CFT073 Protein 2e-35 46