Gene Information

Name : SVI_3237 (SVI_3237)
Accession : YP_003557986.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Resistance
Product : MarR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 3665598 - 3666044 bp
Length : 447 bp
Strand : -
Note : -

DNA sequence :
TTGACGTTATCCCTAGGCTATATGTTTACTATCGGACAAGTCGCTAAAGCCGCCGAGGTCAATGTTGAAACGGTGCGCTA
TTATGAAAGACAAGGCTTAATTAAACAGCCAGCGAAACCCGTTCAGGGTTATCGAGATTACCCAACAGACACCTTGCTAA
GACTGATATTTATCCGCCGTGCCCAGGTGCTGGGTTTTACTCTCAATGAGATAGCTTCCTTGATCTCCTTGAGCGGGGAA
CACTGCAGCGATATTCAGCTACTGGCGCAGAAGAAGCTATTGGCGGTGCGGATTAAGATAGACGAGCTGCAACGACTAGA
GCTGAGTCTGGCTAATTTGGTCGATAAGTGTCGCCATAATGCTGATGAAACCTCTTGTCCCATCATTTCCTCTCTGGTTC
CGGAGCATGCACTGGTTAAAACTAGCCATGGCCTTTCTAAAAATTAG

Protein sequence :
MTLSLGYMFTIGQVAKAAEVNVETVRYYERQGLIKQPAKPVQGYRDYPTDTLLRLIFIRRAQVLGFTLNEIASLISLSGE
HCSDIQLLAQKKLLAVRIKIDELQRLELSLANLVDKCRHNADETSCPIISSLVPEHALVKTSHGLSKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 6e-26 48
merR ACK44535.1 MerR Not tested SGI1 Protein 8e-27 45
merR AET25401.1 MerR Not tested PAGI-2(C) Protein 8e-27 45
merR YP_006098391.1 mercuric resistance operon transcriptional regulator Not tested Tn2411 Protein 1e-26 45
merR AFG30124.1 MerR Not tested PAGI-2 Protein 8e-27 45
merR AGK07025.1 MerR Not tested SGI1 Protein 3e-26 44
merR AGK07083.1 MerR Not tested SGI1 Protein 3e-26 44
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 4e-25 44
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 3e-25 44
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 5e-26 44
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 8e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVI_3237 YP_003557986.1 MarR family transcriptional regulator BAC0688 Protein 2e-25 48
SVI_3237 YP_003557986.1 MarR family transcriptional regulator BAC0686 Protein 6e-25 46
SVI_3237 YP_003557986.1 MarR family transcriptional regulator BAC0689 Protein 4e-25 45
SVI_3237 YP_003557986.1 MarR family transcriptional regulator BAC0683 Protein 3e-26 45
SVI_3237 YP_003557986.1 MarR family transcriptional regulator BAC0684 Protein 4e-26 45
SVI_3237 YP_003557986.1 MarR family transcriptional regulator BAC0232 Protein 6e-25 44
SVI_3237 YP_003557986.1 MarR family transcriptional regulator BAC0687 Protein 6e-25 44
SVI_3237 YP_003557986.1 MarR family transcriptional regulator BAC0682 Protein 4e-22 43