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Name : ribD (SVI_3198) Accession : YP_003557947.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 3620186 - 3621325 bp Length : 1140 bp Strand : - Note : - DNA sequence : ATGTGGTCAATAGAAGATACTGAATTTATGAGCCGTGCAATCAAACTTGCACGTCGAGGCTTATATACCACTCGCCCTAA TCCCTGCGTCGGTTGCGTCATCACCTTAGATGATCAGATTTTGGGTGAAGGTTTCCATATTCAAGCCGGTGGCCCCCATG CCGAGGTACACGCCTTAGCCATGGCCACGAAGCGCGCCAGTCAAGCTGCTCTAAAGGGCGCAACAGCCTATGTTACCTTA GAACCTTGCAGCCATTATGGTCGCACTCCTCCCTGCGCAGAAGCACTGATTAAACACGGCATTTCCCGTGTTGTAGTGGC TGTAGAAGATCCCAATCCTCAAGTGTCGGGTCGAGGCATTAAGATGCTCAGAGATGCTGGCATAGAGGTCGATGTTGGTC TGCTTAGTGATGAGGCTGCTGGAATCAATCCAGGTTTTATGAAACGCATGGAGAGGGGACTTCCTTGGGTGACGGTAAAG CTTGCTTCTAGCCTAGATGGCAAGACGGCCTTGAGTAACGGCGCATCAAAATGGATCACAGGTCCAGAGTCTCGCCGTGA TGTGCAGCGTCTAAGAGCGCGTAATGAAGCCTTGGTCACAGGCATAGAAACTGTGCTGCTGGATGACCCATGCCTCAATG TACGTCACAGTGAGCTAGGCTTGTTATCGGAGCAAGTCGATGCAGACTCATTGCACCAGCCTCTTAGGGTGGTACTCGAT AGCCGCGCCAGACTCACCTCCACGGCTAAGTTATTTACTGTTACCAGTCCTATCCTACTGGTTTCTTGTATCGATTATCC TCAGGCTGAAAAAGACACTTGGCCGCAACATGTTTCCGGGCTCATTCTGGCATCTGACAATGATGGCAGAGTAGAGTTAA CGGCCCTGTTTGCTCACTTAGGTAAAACCTATAATTCGGTGTTAATCGAGGCCGGAGCAACACTGGCTGGTAGTGTCATA AGCCAGAATCATGCCGATGAGTTAATCCTCTATCAGGCGATGAAAATTTTAGGCTCGAACGGACGCAATTTAATCTCTCT GCCTGATTATACAGATATGGCAGATATTCCATCCGTCGAATTAATCGATGAACGTAAATTGGGTGGTGACACCCGTTTGA CGTTAAAAATAAGGTCATAA Protein sequence : MWSIEDTEFMSRAIKLARRGLYTTRPNPCVGCVITLDDQILGEGFHIQAGGPHAEVHALAMATKRASQAALKGATAYVTL EPCSHYGRTPPCAEALIKHGISRVVVAVEDPNPQVSGRGIKMLRDAGIEVDVGLLSDEAAGINPGFMKRMERGLPWVTVK LASSLDGKTALSNGASKWITGPESRRDVQRLRARNEALVTGIETVLLDDPCLNVRHSELGLLSEQVDADSLHQPLRVVLD SRARLTSTAKLFTVTSPILLVSCIDYPQAEKDTWPQHVSGLILASDNDGRVELTALFAHLGKTYNSVLIEAGATLAGSVI SQNHADELILYQAMKILGSNGRNLISLPDYTDMADIPSVELIDERKLGGDTRLTLKIRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-64 | 47 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-64 | 47 |
