Gene Information

Name : SVI_2673 (SVI_2673)
Accession : YP_003557422.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3040895 - 3041581 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGATAAGAGTCAGTGGATTAACTAAAGAATATCAGATGGGTGAGTCGTCAGTTTTTGCCCTAAGAGGTGTCGATTTTAC
CATTAAACAAAATGAATTTGTTGCGATAATGGGGCCATCTGGCTCGGGTAAATCCACCTTGATGAACATCATAGGCTGTT
TGGATAAGCCTAGCTCGGGGAGCTACCAGCTCAACAAGCAAGAGGTTGGCAGTTTGGATGATGATGAATTATCCGCGGTG
CGAAACAAGGAGATAGGTTTCGTGTTTCAAAGTTTTCATCTGTTACCAAGAATGACAGCGTTGCAAAACGTGCTTTTACC
TTTACGATATGCCTCTCCCCCAATTGATGATACCAGCTACGCCGTTGAACTCTTGCTGCGAGTCGGCTTAGGTTCACGCC
AAGATCATAGACCCAATCAGTTATCTGGTGGACAGAGACAAAGAGTCGCTATCGCTCGCGCTTTGGTTAATCGGCCAACC
ATATTACTGGCCGATGAACCTACGGGGGCACTGGACAGTAAGACATCGGTGGAGATTATGAATCTATTCACTGAGTTGCA
TAAGGCTGGTCAAACCATCATTTTAGTGACCCATGAAGAGGAAGTGGCAGCCTATGCCCAGCGGGTGATCCGCATGCGAG
ATGGTCATATCGTAGAGATAGAGGAGCGTGGTGTCTATGCCGCTTAA

Protein sequence : 
MIRVSGLTKEYQMGESSVFALRGVDFTIKQNEFVAIMGPSGSGKSTLMNIIGCLDKPSSGSYQLNKQEVGSLDDDELSAV
RNKEIGFVFQSFHLLPRMTALQNVLLPLRYASPPIDDTSYAVELLLRVGLGSRQDHRPNQLSGGQRQRVAIARALVNRPT
ILLADEPTGALDSKTSVEIMNLFTELHKAGQTIILVTHEEEVAAYAQRVIRMRDGHIVEIEERGVYAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVI_2673 YP_003557422.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-54 56
SVI_2673 YP_003557422.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-45 51
SVI_2673 YP_003557422.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-43 45
SVI_2673 YP_003557422.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-42 43