Gene Information

Name : SVI_2556 (SVI_2556)
Accession : YP_003557305.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Resistance
Product : sulfate permease family protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 2917141 - 2918697 bp
Length : 1557 bp
Strand : +
Note : -

DNA sequence :
ATGTTCGATATAATTCGTCACAAAACTGCTAGCAGTAAAGCTGATCTACTCTCAGGCTTAACTGTCGCACTCGCACTGGT
ACCTGAAGCTGTCGCATTTGCTTTTGTCGCCGGTGTGGAGCCAATGGTGGGCCTCTATGCCGCTTTCATCATGGGTCTAA
TCACTGCACTCATAGGTGGACGTCCGGGCATGATCTCAGGCGCTACCGGTGCTATGGCCGTGGTCATGGTCGCCTTGGTC
GCCGAGCACGGGGTGGCTTACCTCTTCGCCGCTGTTGTGTTAGCCGGTATACTCCAGGTCTCATTTGGCCTGCTCAAACT
CGGGAAGTTTATTCGCATCGTGCCCTATCCTGTGATGATAGGTTTCGTCAATGGTTTAGCCATAGTCATCTTCTTAGCAC
AACTGGGTCAGTTTAAAGTACCTGATATTAATGGTGTTTTGACTTGGTTGCCCCAAGATCAACTCGCTCTGATGATTGGT
CTAGTGGCGCTCACTATGGGCATAATACATTTCTTGCCTAAGCTAACCACAGCCATCCCCTCTTCACTCGTTGCTATTGT
GACTGTCACCCTTATGGTGGTTTTCTTAGAGCTAGATACCCGTACAGTGTTAGACTTCCTCAAGTCCATGAGTGGTGATG
AGAATGCAACCATAGCCGGAAGCTTACCTAGTTTCTCTATCCCTGCGGTGGCATTCAATTTAGAGACCCTGTATATCATT
CTGCCTTACTCACTCATTCTTGCCGCTGTTGGTTTGATAGAGTCTCTGCTGACACTCACAGTTATCGATGAGATGACCAA
CACTCGTGGCAAAGGTAACAAGGAATGTATCGGCCAAGGTGTAGGTAACATCACCAGCGGTTTCTTCGGTGCCATGGGTG
GTTGTGCCATGATTGGACAGTCAATGATCAACATCAACTCAGGTGGACGTGGTCGCCTGTCCGGTGTTACTGCGGCCTTG
ACACTGCTTGGTTTCATCCTGTTCGGTTCGGCTATGATAGAGATGATCCCCCTCGCCGCTCTGGTGGGTGTGATGTTTAT
GGTTGTTCTCGGTACATTCGAGTGGGCCAGCTTTAAGGTGATGCGTAAAGTGCCTAAACACGATGCCTTCGTCATTGTCT
TGGTTACTGTTGTCACTGTGTTTACTGATTTGGCATTTGCCGTGTTCGTCGGTGTCATAGTCTCAGCCCTAGTATTTGCC
TGGGAGCATGCTAAGCATATCAATGTAGAGATAACTGAAGATGCCAATGGTTGGAAAGTCTATAAACTCAACGGACCTCT
ATTCTTCGGTTCTGCGGCCGATTTCTTAGAATTATTCCACAACAATACCGATCCCGATGATGTGATAGTCGATTTCCAAA
ATTCACGTGTATGTGATCACTCGGCGCTGGATGCCATTGATACCCTAGCTGAACGATATGTGGCATCGGGTAAGAAGTTA
CATCTGCGTCACTTGAGCAATGACTGTAAGCGGTTACTGCATAAGGCAGGCGACTTGGTCGAAGTGAACCTTATCGAAGA
TCCTCACTATAAGATTGGCGATGATAAGCTAGATTAA

Protein sequence :
MFDIIRHKTASSKADLLSGLTVALALVPEAVAFAFVAGVEPMVGLYAAFIMGLITALIGGRPGMISGATGAMAVVMVALV
AEHGVAYLFAAVVLAGILQVSFGLLKLGKFIRIVPYPVMIGFVNGLAIVIFLAQLGQFKVPDINGVLTWLPQDQLALMIG
LVALTMGIIHFLPKLTTAIPSSLVAIVTVTLMVVFLELDTRTVLDFLKSMSGDENATIAGSLPSFSIPAVAFNLETLYII
LPYSLILAAVGLIESLLTLTVIDEMTNTRGKGNKECIGQGVGNITSGFFGAMGGCAMIGQSMININSGGRGRLSGVTAAL
TLLGFILFGSAMIEMIPLAALVGVMFMVVLGTFEWASFKVMRKVPKHDAFVIVLVTVVTVFTDLAFAVFVGVIVSALVFA
WEHAKHINVEITEDANGWKVYKLNGPLFFGSAADFLELFHNNTDPDDVIVDFQNSRVCDHSALDAIDTLAERYVASGKKL
HLRHLSNDCKRLLHKAGDLVEVNLIEDPHYKIGDDKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 2e-68 44
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 2e-68 44
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 2e-68 44
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 2e-68 44
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 2e-68 44
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 2e-68 44
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 2e-68 44
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 2e-68 44
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 2e-68 44
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 2e-68 44
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 2e-68 44
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 2e-68 44
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 2e-68 44
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 7e-66 43
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 7e-66 43
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 9e-66 43
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 9e-66 43
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 3e-68 43
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 4e-68 43