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Name : thiC (SVI_2371) Accession : YP_003557120.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Unknown Product : thiamin biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2718162 - 2720150 bp Length : 1989 bp Strand : - Note : - DNA sequence : GTGAGATTGCTTATGTCAAACCGCCGCGAAACCCGAGCTAAAGCTCAAGAGTTCATCGATACCCTAAAGCCGCTACAGCA CCCTAATTCTGAGAAAGTCTATCTAACGGGTAGTCGTGAAGACCTCCGTGTCGGTATGCGCCAAATTCTCCAGTCGGATA CCATGGTTGGGGGGACCGAGCCTGATCCCATCTTGAAGCCCAATGCCCCGCTAAAAATCTATGACTGTGCCGGGCCCTAT TCAGATCCTGATGCCGATATCAATGTCCGTAAGGGCCTGGGTAAATTCAGAAATAACTGGATTATAGAACGTGATGATAC TGAGCAGCTTAGCGGTGTCAGTTCAGGTTTTACTCAAAAAAGACTCGCCGACGATGGCTTAGATCACTTGAGATTCGATT CTCTGCTTCCTCCACGAAAGGCAAAACCTGGCCAGTGTGTTACCCAGTTACATTATGCCAGGAAAGGCATTATCACCCCG GAAATGGAATATATTGCCATTCGGGAAAATATGGGTCAGTCAGAGATCACCGACGAGACATTGACCCGCAAGGCGCCAGG AGAAAGCTTCGGAGCGTCGATTACTGAGCCGATTACTCCCGAGTTTGTCAGAAGTGAAATCGCCAGAGGGCGTGCGATTA TTCCTTTGAATATCAACCATCCAGAAGCCGAGCCCATGATCATTGGCCGAAACTTTCTGGTTAAGGTTAATGCTAATATC GGTAATTCAGCAGTGACTTCTTCTATCGAAGAGGAGGTCGAAAAACTGGTCTGGTCTACTCGATGGGGCGCGGATACCGT GATGGACCTGTCTACTGGCCGTTATATACATGAAACGCGAGAGTGGATCATTCGTAACTCTCCGGTTCCTATCGGGACTG TGCCTATCTATCAGGCTTTAGAGAAGGTCAATGGCGTCGCCGAAGATCTGAATTGGGCCGTGTTTAAGGATACCTTGATT GAACAGGCAGAGCAGGGCGTCGATTACTTCACCATTCATGCCGGCGTATTACTGCGTTACGTGCCAATGACGGCAAATCG CCTGACGGGTATTGTCTCACGTGGTGGCGCCATCATGGCCAAGTGGTGTCTGTCACATCATCAGGAAAACTTCCTCTACG AGCACTTCAGAGAAATTTGTGAGCTTTGTGCCGCCTATGACGTGTCCTTATCTCTGGGGGATGGCATGCGTCCGGGCTCT ATCGCAGATGCGAACGATGAGGCGCAGTTTGCTGAGCTGGAAACCTTAGGCGAGTTGGTTAAAATCGCTTGGGAGTACGA TGTACAGACCATCATTGAAGGTCCTGGTCACATTCCCATGAATCTTATCAAAGAGAATATGGAAAAACAGTTAGAGGTAT GTGACGAAGCCCCTTTCTATACCTTAGGCCCACAAACGACAGATATTGCACCTGGATATGATCACTTCACCTCAGGTATT GGCGCCGCCATGATTGCCTGGTTTGGTTGCTCCATGCTCTGTTATGTGACACCTAAAGAGCACCTTGGATTGCCAAACAA GGAAGATGTGAAGCAAGGATTAATCACCTATAAGATAGCGGCTCATGCCGGTGATGTGGCTAAAGGACATCCGACTGCGC AAATTCGCGACAATGCCTTATCCAAGGCTCGTTTCGAGTTCCGTTGGGAAGATCAATATAACCTAGGACTGGACCCGGAA ACTGCCAAAGCCTATCACGATGAATCTCTGCCTCAGGAATCGGCCAAGGTAGCTCATTTCTGCTCAATGTGTGGACCTAA GTTCTGTTCGATGAAAATCAGTCAAGAGGTGCGTGAATATGCGGCGGCTCAAAAGCTTGAGATACAGACCGATGAAGAGT TTAAGGCGAAAAACACTGCCGTCTTAAGCTCTAATCTGGATAGAGAGAAGGGGATGGCCATGATGTCGGCAGAGTTTAAG GCTAAAGGCGCCGCTTTATATCATGAAGCTGGTGCGGCTAAACCTGTTCTGGATGAGGTTGAGGGCTAA Protein sequence : MRLLMSNRRETRAKAQEFIDTLKPLQHPNSEKVYLTGSREDLRVGMRQILQSDTMVGGTEPDPILKPNAPLKIYDCAGPY SDPDADINVRKGLGKFRNNWIIERDDTEQLSGVSSGFTQKRLADDGLDHLRFDSLLPPRKAKPGQCVTQLHYARKGIITP EMEYIAIRENMGQSEITDETLTRKAPGESFGASITEPITPEFVRSEIARGRAIIPLNINHPEAEPMIIGRNFLVKVNANI GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLNWAVFKDTLI EQAEQGVDYFTIHAGVLLRYVPMTANRLTGIVSRGGAIMAKWCLSHHQENFLYEHFREICELCAAYDVSLSLGDGMRPGS IADANDEAQFAELETLGELVKIAWEYDVQTIIEGPGHIPMNLIKENMEKQLEVCDEAPFYTLGPQTTDIAPGYDHFTSGI GAAMIAWFGCSMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAGDVAKGHPTAQIRDNALSKARFEFRWEDQYNLGLDPE TAKAYHDESLPQESAKVAHFCSMCGPKFCSMKISQEVREYAAAQKLEIQTDEEFKAKNTAVLSSNLDREKGMAMMSAEFK AKGAALYHEAGAAKPVLDEVEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 68 |
