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Name : serS (SVI_2292) Accession : YP_003557041.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2624639 - 2625925 bp Length : 1287 bp Strand : - Note : - DNA sequence : ATGTTAGATCCAAAATTGTTGCGTAACGAATTAGAAGTCACAGCCGAGCGTCTGGCCACTCGAGGTTTTATTCTGGATGT TGAGCGTCTCAGTAAGTTAGAGGAAAAGCGTAAGTCATTACAGATGACTACCGAAGAGCTGCAAGCATCCCGCAACGCAA TTTCTAAGTCCATCGGTCAGGCGAAAGCTAAGGGTGAAGATGTTGCGCCTATCATGGCTAAAGTGGGCGATCTCGGTACC GAGCTAGATGCAAAAAAATCTGAGCTGGCAGCCTTATTAGCTGAACTCAATGCCATCGCGATGAGCGTACCTAACTTACC CGACGAGTCAGCACCTCTGGGCGCCGATGAGAGCGAGAATGTTGAAGTGCGTCGTTGGGGAACACCTAGAGAATTTAACT TTGAAGTCAAAGACCATGTGGATCTTGGTGAAGCTCTCGGTGGTTTAGACTTTAAAAATGCCGTTAAATTAACTGGCTCT CGTTTCATCATAATGAAAGGTCAAATAGCCCGCATGCATCGAGCCCTGGCTCAGTTCATGTTAGATCTGCATACCGATGA GCATGGTTACACTGAGGCATATGTACCTCTTCTGGTTAACGAAGACAGTTTGTTCGGCACAGGCCAGTTACCTAAATTTG GTGAGGACCTGTTCCACACTAAACCTGCTACTGAAGAAGGACAGGGCCTGAGTCTTATCCCGACGGCCGAAGTACCGCTG ACAAACTTAGCTCGCGATACCATAATCGATGAAGATGAGCTGCCAGTTAAGCTGACGGCTCATACGCCTTGCTTCAGAAG TGAGGCGGGTTCATACGGTCGTGATACACGTGGTCTTATTCGTCAGCACCAATTTGATAAGGTTGAATTGGTTCAGATGG TTAAGCCTGAAGACTCAATGGCTGCATTGGACGCGTTAACCGGTCATGCCGAGACAGTGCTGCAAAAGCTGGATCTTCCA TACCGCACCGTCATTCTTTGTACCGGTGATATGGGCTTCGGCGCGAGCAAGACCTTCGATATCGAAGTCTGGCTGCCGGC GCAAAATACCTTTAGAGAGATCTCATCATGTAGCAACATGCAAGATTTCCAGGCACGTCGTATGCAAGCTCGTTATAAGG CAAAATCTGCCAAGAAACCTGCATTGCTGCACACGTTAAATGGATCGGGTCTTGCGGTAGGTCGTACACTCGTGGCTGTG CTTGAGAACTACCAGAATGAAGATGGCAGTATCACAGTGCCGGAAGTCTTGCGTCCATATATGAATGGGCTCGAAAAAAT CGGCTAG Protein sequence : MLDPKLLRNELEVTAERLATRGFILDVERLSKLEEKRKSLQMTTEELQASRNAISKSIGQAKAKGEDVAPIMAKVGDLGT ELDAKKSELAALLAELNAIAMSVPNLPDESAPLGADESENVEVRRWGTPREFNFEVKDHVDLGEALGGLDFKNAVKLTGS RFIIMKGQIARMHRALAQFMLDLHTDEHGYTEAYVPLLVNEDSLFGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL TNLARDTIIDEDELPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQMVKPEDSMAALDALTGHAETVLQKLDLP YRTVILCTGDMGFGASKTFDIEVWLPAQNTFREISSCSNMQDFQARRMQARYKAKSAKKPALLHTLNGSGLAVGRTLVAV LENYQNEDGSITVPEVLRPYMNGLEKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-107 | 56 |
