|
Name : SVI_2262 (SVI_2262) Accession : YP_003557011.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Unknown Product : sensor histidine kinase/response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0642 EC number : - Position : 2587837 - 2590638 bp Length : 2802 bp Strand : + Note : - DNA sequence : ATGAAGAAAATTAAATGGAAAGCTTCCTTAGTCACTAAGCTCACAGTGTCATTTACCGCCGTGCTCATTTGTCTATGGAT CATGATTGAGTTCCTCTCATACAGCAACACATTCAATCGTATTCTGGATAGGAACCTCATAGCCTATGGAGAATTAAGCG ATCTAAAATCAGAAGTTAGCAATAGCCTATTTAGTGGCGCTAAATATGATGCTATTCAATTCGATCAGCGATTACATCAA TTCTCTTCAATAGATAAGATCAATGCCTATGAAATAGTTGCCCGTTACTTTCCTTTATCAGACAAAAAAAATACCCAAAA CGATACCTTGAGTATGTGGATAACCCAAACTTTTGGTAATGCGGGTCAGCATCGATATATAGACAGCTTTATCTTTCAAC CCCATAAAGGGGTCTCAATTTATGCTTCAACATATGCTGATAAAGCGTACTTTCAGAAAAGGTTTAACGAAATAAAACAA CTGACGAGTCAACAGACTGTTGACGGTTATCGCTGGGGTCAGCCCATTTTTGACAAAAAGTCAGGCATTTACTACCTCTT ATTTAGTTATTCGAGTGATCACATAAACCCTAACTCCCCCCAGGTCGGGTTTGTGATTAATTTAACATCGACGATAAGCT TAAATACCTCATCAGAATCCAGCGCAAAGAGCTTTTTCATGACTAGTGAGAGTGAGATGTTCTCTAAATCAACTCTGAGA TTATCACCAAAAATCTTAACCACGCTAAAAAATGAATTTAACGACCCCAATAAGAAAGAAGACAAAAGTATCCCTCACCC CATTGAGCAGTACTACATTATCAAAGAGCACATCAAAGGGCCCGGATGGCTACAGGTCACATTGGTATCAAAAACATTTC TACAAAATTTAGCCCTCACTCCTTTTTTCAGTGAGCTTCCCTGGTCACTTCTCGCACTGGCACTTATGGCTTTTGTTTTA TTGCATGTATTGCGAATTAATCTAACAAAACCGATAGGTCACTTTGTGAGCATCATTAATGGCGACGCTCAGCCCACCTT CGAACGGCGTCTACCTGAAACCCGCCAGGATGAATTAGGCCAGATAGCCAAGGCCTATAACCATTTACTCGATACAGTGA AGGAAAGCCATGACGTACTTGAGAAAAAGGTAGCCCAAAGAACCCATGAATTGGCCATCACGACCCAAGAGGCTGAAAAG GCGAATATGCGAAAGTCTGAACACCTTACCGATATCAGTCACGAAATTCGGACCCCTCTCAATGGCATATTAGGTTCGTT AGAGCTATTGCGTAATACTCAATTAGACGCTAAACAAGCCGATCTTGGTGACACTGCTTTTCACTGTGCAAGTTCACTTT TAGCCATTATCAACAACTTACTCGATTTTTCACGCATTGAAGCCGATCAAATTGAGCTTAACTATCAGCTTTGCTCCATA TTCCAATTAGCCGACAACGCTATGCTCACCATACAAAATAGAGTGATAAATCGCCCAATTTCACTCGAATGTATTGTGAA TGCCGATGTACCAGAAAAAGCACTATTAGACCCCTTGAGAGTGAGGCAAATATTAGTTAACTTATTAGGCAACTCCGCCA AATTTACAGAAGACGGCTATATACTTTTACGTATAGAAGTCGTTGAGAATCATCTTTATTTTAGTGTTGAAGACACAGGT GATGGGATAGCGATTCAAGATCAGCAACGGATATTTGAACCTTTTGCTCAAAGCTGCCATCACAAAGCAGGCTCAGGACT TGGTTTGCCTATTTCTGCAAAGCTTGCCCTGAAGATGCAAGGCCAGCTAACCATGTGCAGTACTCTTGGTTACGGGAGCA CTTTTATTTTAGATCTGCCTCTCACTGAAGCCAATGCTCCGCTCACTTTGCCACCTGAATCCATCATAGCCCCCTTAGCT TTACACAGACAATTATCCTTATGGGGCGCTGTTCCGATTGAGGGGGACAATGAAGAGCTGTGCCATAAGGAGCTGGCCCA CTTGCCAGCCAGGCTATGGCAGCGCCTTCATGAGATCCGTTACAACTTACCTCAAGAACAGACGAATAACACACTAAATT TACTTCCTTGGAAATTGAAAATTCTCTTGGTCGACGATGTCGAAACGAATAGAAATATTATTGGCATAATGTTAGCCGAA TTAGGCCAGCAAGTATTCACGGCCAGCAGTGGTAAAGCCGCATTACAAAAAGGACAAAGACATATCTTCGATCTGGTTTT GATGGATATTCGCATGCCCGGACTCGATGGTTATCAAACAACACAAATGTGGCGTAACAGTGAAGATATTTTAGATACTG AGTGCCCAATATTTGCTCTGACGGCAAATGCTAACCCAATGGATCGTGACACCATAGAAGCCATCGGAATAAACAGCTAT TTAACCAAGCCCGTTTCTTTAGCGCAGCTAAACAGTGCCTTGGAAACAGCAGCAGATCTGCAATTGGATCGCGATATGCC ATTAGTGATAAATACCGATATCGATGACCCCATGATAGATTTCTCTCAGACAGATCTCAATTATAGACTCGCCGTTCATT TAACAGATATTGTCGAGCAAGCTAAACAGTTTATAGCCAATGAGGAGTGGAAACTCCTCAGTGATGTACTACATACAATT AAAGGCAGTGCCGGTTTGGCGGGACTTAAACATATTTTTGATACTGCAGTCGATTTAGAAGTCATTCTCGAAACCGAAGA ATGTCTAAGCTTAGACGTATTCTCACCTCTGGAAGGACTAATTCAGGCACTCGCATCAGCACCAACGACCTGCACAGCCT AA Protein sequence : MKKIKWKASLVTKLTVSFTAVLICLWIMIEFLSYSNTFNRILDRNLIAYGELSDLKSEVSNSLFSGAKYDAIQFDQRLHQ FSSIDKINAYEIVARYFPLSDKKNTQNDTLSMWITQTFGNAGQHRYIDSFIFQPHKGVSIYASTYADKAYFQKRFNEIKQ LTSQQTVDGYRWGQPIFDKKSGIYYLLFSYSSDHINPNSPQVGFVINLTSTISLNTSSESSAKSFFMTSESEMFSKSTLR LSPKILTTLKNEFNDPNKKEDKSIPHPIEQYYIIKEHIKGPGWLQVTLVSKTFLQNLALTPFFSELPWSLLALALMAFVL LHVLRINLTKPIGHFVSIINGDAQPTFERRLPETRQDELGQIAKAYNHLLDTVKESHDVLEKKVAQRTHELAITTQEAEK ANMRKSEHLTDISHEIRTPLNGILGSLELLRNTQLDAKQADLGDTAFHCASSLLAIINNLLDFSRIEADQIELNYQLCSI FQLADNAMLTIQNRVINRPISLECIVNADVPEKALLDPLRVRQILVNLLGNSAKFTEDGYILLRIEVVENHLYFSVEDTG DGIAIQDQQRIFEPFAQSCHHKAGSGLGLPISAKLALKMQGQLTMCSTLGYGSTFILDLPLTEANAPLTLPPESIIAPLA LHRQLSLWGAVPIEGDNEELCHKELAHLPARLWQRLHEIRYNLPQEQTNNTLNLLPWKLKILLVDDVETNRNIIGIMLAE LGQQVFTASSGKAALQKGQRHIFDLVLMDIRMPGLDGYQTTQMWRNSEDILDTECPIFALTANANPMDRDTIEAIGINSY LTKPVSLAQLNSALETAADLQLDRDMPLVINTDIDDPMIDFSQTDLNYRLAVHLTDIVEQAKQFIANEEWKLLSDVLHTI KGSAGLAGLKHIFDTAVDLEVILETEECLSLDVFSPLEGLIQALASAPTTCTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0256 | YP_002345336.1 | two-component sensor/regulator | Not tested | Not named | Protein | 1e-118 | 45 |
