Gene Information

Name : SVI_2244 (SVI_2244)
Accession : YP_003556993.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2573684 - 2573899 bp
Length : 216 bp
Strand : -
Note : -

DNA sequence : 
ATGGACTTAAGCGCTATCGTTAATCAGCTGTCTCAGTTATCGACACGTTCGGCCCAAGAGGTACAAGCAAAGATGTCTGC
TGGGGATCTAAATGACCCGGATAAGATGATAAAAGCGCAGTTTTCAATGCAACAATACTCAAATTTTGTTTCCTATGAAA
GCGCGATGATTAAGGCGGTCAAAGATATGATCCAAGGCATCATTTCAAAAATTTAG

Protein sequence : 
MDLSAIVNQLSQLSTRSAQEVQAKMSAGDLNDPDKMIKAQFSMQQYSNFVSYESAMIKAVKDMIQGIISKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaG NP_456122.1 putative pathogenicity island protein Virulence SPI-2 Protein 5e-17 50
ssaG NP_805077.1 pathogenicity island protein Virulence SPI-2 Protein 5e-17 50
ssaG NP_460371.1 type III secretion system apparatus protein Virulence SPI-2 Protein 5e-17 50
ssaH AAC28874.1 SsaH Virulence SPI-2 Protein 4e-17 50
ssaG CAA12193.1 SsaG Virulence SPI-2 Protein 4e-17 50
ssaG YP_216414.1 secretion system apparatus protein SsaG Virulence SPI-2 Protein 9e-17 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVI_2244 YP_003556993.1 type III secretion system apparatus protein VFG0507 Protein 2e-17 50