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Name : SVI_2241 (SVI_2241) Accession : YP_003556990.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Virulence Product : type III secretion system apparatus lipoprotein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 2572236 - 2572967 bp Length : 732 bp Strand : - Note : - DNA sequence : ATGACGTATTTTAAGTGTACTTTATTATTGCTAGTCATATTGTTGAGTGGCTGTAAGGTTGATCTATTTAGAGATCTTTC TCAAGACGATGCGAATCAGATGGTTGCACTTTTAATGTTACACCATATTGATGCAGCTTCTGAACTTGATGATAAATCGG GAACTATTACTCTAAAAATAGATAAAGATCAGTTTATTAACGCTGTTGAACTGTTACGTCAAAATGGTTTCCCGAAACCC CATTACTCTAGCATTGAAGATCTATTTCCTTCTGGTCAGCTCGTGACCTCTCCAACGCAGGAGGAAGCAAAAATGAATTA CCTTAAAGAACAGCAATTAGAGCGGACCTTATCGACCATGGATGGCGTCATAAGTGCTCGGGTGACCATAGCCGAGATGG AGTTAGATCCAAATAGACGAGAGCCAACAGATAAGTCGGCATCTGTTTTCATTAAGTATTCACCACAGGCTAATCTCAGT AATGCAAAAAATAACATTAAGAAATTGATACAAAATTCTGTCACTGGTTTAAGTGTAGATAACATTAGTGTCTACCTTCA GGAGTCTAACTATCGATATCAGCCCATTACGCCATCGACGAGTCATACAGGCAACAGTGGTTTGTTAAGTGCGATTGAGA CGTACAAACTGCCATTAGTGACTGGCCTATTGATGATATTTCTTATAAGCATGGGTGGTATGTGGTGGATGAGGGGACGA TATAAAACTTAA Protein sequence : MTYFKCTLLLLVILLSGCKVDLFRDLSQDDANQMVALLMLHHIDAASELDDKSGTITLKIDKDQFINAVELLRQNGFPKP HYSSIEDLFPSGQLVTSPTQEEAKMNYLKEQQLERTLSTMDGVISARVTIAEMELDPNRREPTDKSASVFIKYSPQANLS NAKNNIKKLIQNSVTGLSVDNISVYLQESNYRYQPITPSTSHTGNSGLLSAIETYKLPLVTGLLMIFLISMGGMWWMRGR YKT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 5e-48 | 50 |
| ssaJ | CAA12196.1 | SsaJ | Virulence | SPI-2 | Protein | 5e-40 | 47 |
| ssaJ | CAA70532.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 3e-40 | 47 |
| ssaJ | NP_460374.1 | needle complex inner membrane lipoprotein | Virulence | SPI-2 | Protein | 4e-40 | 47 |
| ssaJ | YP_216417.1 | secretion system apparatus protein SsaJ | Virulence | SPI-2 | Protein | 2e-40 | 46 |
| ssaJ | NP_456119.1 | putative pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 2e-40 | 46 |
| ssaJ | NP_805080.1 | pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 2e-40 | 46 |
| escJ | AAC38379.1 | EscJ | Virulence | LEE | Protein | 2e-34 | 44 |
| escJ | AAC31518.1 | L0039 | Virulence | LEE | Protein | 2e-34 | 44 |
| escJ | YP_003236093.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 2e-34 | 44 |
| escJ | ACU09463.1 | EscJ protein | Virulence | LEE | Protein | 2e-34 | 44 |
| escJ | NP_290273.1 | hypothetical protein | Virulence | LEE | Protein | 2e-34 | 44 |
| unnamed | AAL06364.1 | EscJ | Virulence | LEE | Protein | 3e-34 | 44 |
| ECs4573 | NP_312600.1 | EscJ | Virulence | LEE | Protein | 2e-34 | 44 |
| escJ | AAL57537.1 | EscJ | Virulence | LEE | Protein | 3e-34 | 43 |
| escJ | CAC81857.1 | EscJ protein | Virulence | LEE II | Protein | 3e-34 | 43 |
| escJ | CAI43879.1 | EscJ protein | Virulence | LEE | Protein | 3e-34 | 43 |
| escJ | YP_003223480.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 3e-34 | 43 |
| escJ | YP_003232148.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 3e-34 | 43 |
| escJ | AAK26710.1 | EscJ | Virulence | LEE | Protein | 3e-34 | 43 |
| escJ | AFO66320.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-33 | 41 |
| escJ | AFO66410.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SVI_2241 | YP_003556990.1 | type III secretion system apparatus lipoprotein | VFG0510 | Protein | 2e-40 | 47 |
| SVI_2241 | YP_003556990.1 | type III secretion system apparatus lipoprotein | VFG0725 | Protein | 1e-34 | 44 |
| SVI_2241 | YP_003556990.1 | type III secretion system apparatus lipoprotein | VFG0817 | Protein | 1e-34 | 44 |
