|
Name : kdsB-2 (SVI_1927) Accession : YP_003556676.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 2213294 - 2214031 bp Length : 738 bp Strand : - Note : - DNA sequence : ATGAATGTTACCCTGTTAATCCCGGCACGCTATGGTTCAAGTCGTTTTCCAGGAAAACCACTAGCCCCGATTAACGGCAA GCCGATGATCCAGCATGTTGTTGAACGTGCATCATTAGCCAAAGGCCTGACCTCCATCTATGTGGCAACTGACGATGTTC GCATCAAGGACGCTGTTGAAGCCTTCGGTGGTCAAGTGGTAATGACCAGCCCGGAAGCCGCCTCTGGTACCGACAGAATT GAAGATGCCATTACCCAATTGGGTTTGAAAGATGATGATCTTATCGTCAATCTTCAAGGCGATCAGCCGCTGATCGATCC GATTTCAATCGAACAGATCATCAGCCTGTTCGAACGTCATCCCGGTGAGTTCGGTATGGCTACCTTAGGTTTTGAGATCA CCGAAAAGAGTGAACTCGACGATCCTAAACACGTCAAGATGGTGTTCGATAACGATTTCAATGCACTGTATTTTTCCCGT GCTCGTATTCCCTTCGGCCGTGACACCAACGAATACCCTGTGTATAAACATCTAGGTATCTATGCCTATACCAGAAAGTT TGTATCTACCTTTGCTAAACTTCCATTAGGCCGTTTAGAAGATCTTGAGAAGCTTGAGCAGCTCAGGGCTCTGGAACATG GTTATAAGATCAAAGTCGCTATCAGTGCCTTCGATTCTCCTGAGGTGGATACCCCAGAAGATATCCGCATCTGTGAAGCC AGACTCGCGGTAGATTAA Protein sequence : MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVVERASLAKGLTSIYVATDDVRIKDAVEAFGGQVVMTSPEAASGTDRI EDAITQLGLKDDDLIVNLQGDQPLIDPISIEQIISLFERHPGEFGMATLGFEITEKSELDDPKHVKMVFDNDFNALYFSR ARIPFGRDTNEYPVYKHLGIYAYTRKFVSTFAKLPLGRLEDLEKLEQLRALEHGYKIKVAISAFDSPEVDTPEDIRICEA RLAVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 7e-40 | 44 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-39 | 43 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-39 | 43 |
