Gene Information

Name : SVI_1867 (SVI_1867)
Accession : YP_003556616.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2155394 - 2156038 bp
Length : 645 bp
Strand : +
Note : -

DNA sequence : 
TTGATTTCAGTATATTTAGTCGATGATCATGAGCTAGTTCGCACCGGAATCCGCCGTATTCTTGAAGATGAGCGCGGCAT
TAAAGTTGTGGGCGAAGCGGGTGACGGTGAAACTGCGGTCAAATGGAGTCGAACTAACGAAGCTGATGTGATCCTGATGG
ACATGAACATGCCTGGGATAGGTGGATTAGAAGCGACGCGCAAGATTTTACGTCATCAGTCTCATGCCAAAATCATTGTG
CTAACGATTCAAACAGAAGATCCATTTCCGACTAAGGTGATGCAGGCCGGTGCGTCAGGCTATCTCACTAAAGGTGCGAC
ACCACCTGAGGTGTTACAGGCTATTAGACAAGTGGCACACGGGCAAAGATACCTTTCCCCTGAAATTGCCCAGCAGATGG
CTCTCAGTCAATTTAACTCCAATGATGAAAATCCATTTCAATCACTGTCAGAGCGTGAGTTACAGATCATGATGATGATC
ACCAATGGTGAAAAAGTCAGTGAGATAGCTGTGCAACTCAATTTGAGTCCCAAGACAGTCAACAGTTACCGCTATCGTTT
ATTTGCAAAATTGGGGATCGGTGGTGATGTTGAGCTGACACGCCTTGCGATCCGTTATAAAATGCTAGATGCAGGGCAGT
TTTAG

Protein sequence : 
MISVYLVDDHELVRTGIRRILEDERGIKVVGEAGDGETAVKWSRTNEADVILMDMNMPGIGGLEATRKILRHQSHAKIIV
LTIQTEDPFPTKVMQAGASGYLTKGATPPEVLQAIRQVAHGQRYLSPEIAQQMALSQFNSNDENPFQSLSERELQIMMMI
TNGEKVSEIAVQLNLSPKTVNSYRYRLFAKLGIGGDVELTRLAIRYKMLDAGQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 3e-51 50
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 3e-51 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVI_1867 YP_003556616.1 LuxR family transcriptional regulator VFG1889 Protein 8e-52 51