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Name : SVI_0165 (SVI_0165) Accession : YP_003554914.1 Strain : Shewanella violacea DSS12 Genome accession: NC_014012 Putative virulence/resistance : Unknown Product : S1 RNA binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 195307 - 197649 bp Length : 2343 bp Strand : + Note : - DNA sequence : ATGCAAATGACGCACAATATTGCCCAGATCATTGCTCAGGAACTTAATGTCCGTGAGCAACAAGTCAGCTCGACAATCTC CCTACTCGATGATGGTGCTACTGTGCCTTTCGTCGCTCGTTATCGTAAAGAGGCGACCGGTGGCTTAGATGACACTCAGC TGCGTACATTACACACTAGGTTGAGTTATCTGCGTGACTTAAATGACAGACGCGATGTGATCATCTCCAGTATCAATACT CAAGGTAAGCTGACCCCTGAGCTGAACCGCGCATTATTTGAGGCCGACAGCAAGACACGTCTGGAAGATCTTTATTTGCC CTATAAGCCGAAACGTCGTACTAAGGGGAAAATAGCCATAGAAGCTGGTATTAAGCCATTAGCCGATCACTTGCTTAATA ACCGTAATGCCGATATCGAACAAGAAGCCGCCAAATATATTAAGGCGCAGGCTGGTTTTACTGATAGTAAACTCGTGCTG GACGGGGCTCGTTTCATCTTGATGGAGCGTTTCGCCGAAGATGCAGCCCTGTTGCAGAAAGTGAGACAACATTTAAGCCA AAACTCTGTTCTCGAGAGTCGCATGATTAAGGGAAAAGAGAAGGAAGGGGCTAAGTTCCGCGACTATTTCGAGCACACGG AAAAACTAAGCAAGATACCTTCTCATCGTGCCTTGGCCATGTTGCGTGGACGCAATGAAGGCATATTGAGCCTAAGCATG AACGCAGATCCGAGTAACGAGTCTAAGCAAGGCAGTTATTGTGAGGTGATTATTGCCGATCACTTCAAACTCAACCTGAG TACAGGTGATGTGGATTCATGGTTGAAAACCGTAGTCACAGCTACTTGGCGAATCAAGATTGCGCTACAGATGGAAACTG AGTTTATCGCTAAGATGCGTGAGCATGCAGAGTCCGAGGCAATTAATGTATTTGCCCGCAACCTTGGGGATCTCCTCATG GCAGCGCCAGCGGGAGCCAAGACAACTTTAGGCCTAGATCCAGGATTGAGATCAGGTGTTAAGGTGGCCATAGTTAACAA TACTGGCAAACTCGTCGCACACTCGACCATTTTCCCCCATGCGCCACAGAAGCAATGGGATAAGTCGGTACGTACCTTAG CCAATCTTGCCAAGATGCATAAGGTGGAGCTGATTGCCGTGGGTAACGGCACCGCGTCGAGAGAGACTGATAAGCTGGCT GCTGAATTGATTGCCAGTGTTAAAGCTGAGCTGCCAAGACTGACTAAAATCATGGTTAGTGAGGCTGGGGCATCTGTCTA TTCGGCTTCTGAGCTCGCGGCCAATGAATTTCCCGATCTCGATGTGTCTATTCGTGGTGCCGTCTCTATCGCACGTCGAC TGCAGGACCCTCTCGCCGAGTTAGTCAAGATTGAACCTAAGTCTATCGGTGTAGGCCAGTATCAGCATGATGTGAGTCAG AGTCAGCTTTCCTTGTCACTGGAAGGTGTGGTGGAAGATTGTGTGAATGGTGTCGGGGTAGATCTGAATATGGCATCTGC GCCGCTATTGGCTCAGGTGGCTGGCCTCAATAAGACATTAGCCCGCAATATTGTCACCTATCGAGATGAGAATGGTCAGT TTACTCAGCGTAAACAGTTATTAAAAGTAGCCAGACTCGGGCCTAAGGCCTATGAGCAAGCCGCTGGCTTCCTGCGAATT TTCGATGGTGATAATCCTCTGGATGCATCTTCGGTTCACCCCGAAGCATATTCGCTGGTGGAGACAATAGCTAAGGCCAA GGGTCAGGCGGTCGAGGCGCTAGTGGGTAACACTGAATTACTGCGCACCTTGTCGGCGGAAGAGTTTATTACGGATAAGT TTGGTCTGCCTACAGTGACAGATATCTTAGCCGAACTCGACAAGCCAGGGCGAGATCCCCGTGGTGAGTTCAAGACGGCC ACATTTAAGGAAGGCGTGGAGCAAGTTAAAGATCTTAAGCCGGATATGATCCTTGAAGGTGTGGTGACCAATGTGACTAA CTTCGGTGCCTTTGTGGATGTTGGTGTTCACCAGGATGGCCTAGTACATATCTCATCGCTAACCGATAAATTTATCAGTG ATCCCCATACCATAGTCAAGGCCGGGGATGTGGTGAAAGTGAAGGTGATGGAGATCGATGTAGAGCGTAAGCGTATCGCG CTTACCATGCGTTTAGATGAAAAGGCCGGTGATAAGCCAGCGCCGAGAGCGGTTCAAAGGTCTAATTCAGGTGGCAGTAA GCCAAACCAGCAAGCTAAGTCACACAACAAGTCCCAGCCTAAGCAAGCTAATGCAGCCATGGGTAATGCCTTTGCCGACG CATTTGCCAAGTTGAAAAAATAA Protein sequence : MQMTHNIAQIIAQELNVREQQVSSTISLLDDGATVPFVARYRKEATGGLDDTQLRTLHTRLSYLRDLNDRRDVIISSINT QGKLTPELNRALFEADSKTRLEDLYLPYKPKRRTKGKIAIEAGIKPLADHLLNNRNADIEQEAAKYIKAQAGFTDSKLVL DGARFILMERFAEDAALLQKVRQHLSQNSVLESRMIKGKEKEGAKFRDYFEHTEKLSKIPSHRALAMLRGRNEGILSLSM NADPSNESKQGSYCEVIIADHFKLNLSTGDVDSWLKTVVTATWRIKIALQMETEFIAKMREHAESEAINVFARNLGDLLM AAPAGAKTTLGLDPGLRSGVKVAIVNNTGKLVAHSTIFPHAPQKQWDKSVRTLANLAKMHKVELIAVGNGTASRETDKLA AELIASVKAELPRLTKIMVSEAGASVYSASELAANEFPDLDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQ SQLSLSLEGVVEDCVNGVGVDLNMASAPLLAQVAGLNKTLARNIVTYRDENGQFTQRKQLLKVARLGPKAYEQAAGFLRI FDGDNPLDASSVHPEAYSLVETIAKAKGQAVEALVGNTELLRTLSAEEFITDKFGLPTVTDILAELDKPGRDPRGEFKTA TFKEGVEQVKDLKPDMILEGVVTNVTNFGAFVDVGVHQDGLVHISSLTDKFISDPHTIVKAGDVVKVKVMEIDVERKRIA LTMRLDEKAGDKPAPRAVQRSNSGGSKPNQQAKSHNKSQPKQANAAMGNAFADAFAKLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 58 |
