Gene Information

Name : SVI_1608 (SVI_1608)
Accession : YP_003556357.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1839358 - 1840110 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAGATATCAGTGCTATCACAGTAAAGAATCTCGTTAAGTCAGTGGCTACCCAAGAGGGAGAGCTTACTATCCTCAA
CGGCATCAATATGGATGTCAAGCATGGAGAGAGTATCGCCATTCTTGGGCCATCAGGGTCGGGGAAGTCGACCTTGCTGG
GCTTACTTGCGGCCTTAGACTCTCCAAGTTCCGGTGAGATCATTTTAGACGGTGTTGCCATACAGCATTTAGATGAAGAG
AAGAAGGCGGCAATGCGCAAGCAGAAGGTCAGTTTTATTTTTCAGTCATTCATGTTGGTCGATACACTCAATGCCCTGGA
AAATGTCATGTTACCCGCCGAGTTGGCCGGAATACCTAAGGCTAAAGATAAGGCTAAGGCCATGTTGGAGAGGGTGGGGC
TGAGTCATAGGTTGAATCACTTTCCTAATCAACTTTCTGGTGGTGAGCAGCAACGCGTCGCCATCGCCAGGGCATTTATC
TGTGAGCCCAAGGTGTTATTTGCCGATGAGCCCACAGGAAACCTGGATGCGGCTAATAGTAAGAAGGTGGCGGACATGTT
GTTTGAGCTTAACCGTGAGTGCGAAACGACTCTGGTGTTAGTGACTCACGACCTAGTATTGGCTAAACGATGTGAGCGTC
AGTTACTGATGGACTCGGGTGAACTGACAGAGGCTAGGAATAAGCTGTCAGATGCCACAAAACCTGCGGTAGTCATAATA
GAGAGTGAGCTAACGAAGGCGGAGGCGAGTTAA

Protein sequence : 
MSDISAITVKNLVKSVATQEGELTILNGINMDVKHGESIAILGPSGSGKSTLLGLLAALDSPSSGEIILDGVAIQHLDEE
KKAAMRKQKVSFIFQSFMLVDTLNALENVMLPAELAGIPKAKDKAKAMLERVGLSHRLNHFPNQLSGGEQQRVAIARAFI
CEPKVLFADEPTGNLDAANSKKVADMLFELNRECETTLVLVTHDLVLAKRCERQLLMDSGELTEARNKLSDATKPAVVII
ESELTKAEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-22 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-22 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-22 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVI_1608 YP_003556357.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-28 45
SVI_1608 YP_003556357.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-23 41