Gene Information

Name : ugd (SVI_1495)
Accession : YP_003556244.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 1709055 - 1710221 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTGCAATTGCGGGTACGGGCTATGTTGGCCTATCAAATGCTGTTTTATTAGCGCAACACAATGAAGTAGTTGC
AGTTGATATTATTGCTGACAAAGTAGCGTTAATTAACGCTAAAAAATCAACGGTGGTTGATGTTGAAATAGAAGATTATC
TTGCAAATAAGGTGTTAAATATAAAAGCTACACTTGATAAAGTGGATGCTTATAAAAATGCTGAATTTGTCATTATCGCA
ACTCCTACCGATTATGATCCCGAAACAAATTTTTTTAATACTGATTCTGTTGAAGCAGTGATTAAAGACGTGTTGGAAAT
TAATCCACTAGCTGTGATGATTATAAAATCAACGGTACCCGTTGGTTTTACGAAGTCGGTCAGAGAAGAATTCGGTTGTG
ACAATATACTGTTTTCACCTGAATTTTTGCGTGAAGGTCGTGCGTTACACGACAATCTTTATCCATCACGCATTATTGTA
GGTGAACAAAGTGAGCGAGCTAAAGTATTTGCAGGTTTATTAGTTGAAGGTGCAGTAAAAGAAAATATTGATATATTATT
TACCGATTCAACTGAAGCAGAAGCCATTAAGCTATTTTCAAATACGTACCTTGCCATGCGAGTAGCATATTTTAATGAGT
TAGACACTTATGCTGAGACTCACAGCCTAGATACTCGTCAAATTATTGAGGGAGTGGGCTTAGACCCGCGAATCGGTTCC
CATTACAATAATCCATCTTTCGGATATGGGGGTTATTGTTTACCTAAAGATACTAAACAACTTAAAGCTAACTATGTGGA
TGTGCCTAACAGTTTAATTAGTGCGATTGTTGATGCTAACTCTACCCGTAAAGATTTTATCGCTGACTCTATAATTAGCA
AGAACCCAAAAGTTGTTGGCATATATCGCCTCATAATGAAATCTGGCTCAGATAATTTCCGTGCTTCTTCAGTGCAAGGG
ATTATGAAAAGAATAAAAGCAAAGGGAATCGAAGTCGTTGTGTATGAGCCAGTTCTGGATGAAGCTGTGTTCTTCCACTC
TAGGGTCATATCTGACCTGAGTGAATTTAAGTCTATCTCTGATGTTATTGTATCTAACCGTATGGTGGATGAGATTAATG
ATGTCGCCTACAAAGTATATACACGGGATTTGTTTGGTTCGGATTAG

Protein sequence : 
MKIAIAGTGYVGLSNAVLLAQHNEVVAVDIIADKVALINAKKSTVVDVEIEDYLANKVLNIKATLDKVDAYKNAEFVIIA
TPTDYDPETNFFNTDSVEAVIKDVLEINPLAVMIIKSTVPVGFTKSVREEFGCDNILFSPEFLREGRALHDNLYPSRIIV
GEQSERAKVFAGLLVEGAVKENIDILFTDSTEAEAIKLFSNTYLAMRVAYFNELDTYAETHSLDTRQIIEGVGLDPRIGS
HYNNPSFGYGGYCLPKDTKQLKANYVDVPNSLISAIVDANSTRKDFIADSIISKNPKVVGIYRLIMKSGSDNFRASSVQG
IMKRIKAKGIEVVVYEPVLDEAVFFHSRVISDLSEFKSISDVIVSNRMVDEINDVAYKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-90 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_003556244.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 1e-94 55