Gene Information

Name : SVI_1491 (SVI_1491)
Accession : YP_003556240.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Virulence
Product : galactosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1705730 - 1706290 bp
Length : 561 bp
Strand : +
Note : -

DNA sequence : 
ATGAACCATACTTTTATTCGCACACTCGACTTTTTAATGGCTTTCTTTGGCTTAATCATTACCTTTCCTATTCTACTTGT
TGTTACCATCATCGGTTATTTTGATACGGGCTCGCCTATATTTATTCAGCAACGGGTAGGTAAAAATAAAAAACCATTTA
ACCTGATTAAATTTAGGACTATGTCTGTTGGTACAAAATCAGTCGCCAGTCATCTCGCAAATACAGCTTCTATCACTAAA
TTAGGGGGATTTCTTCGTAAAACAAAAGTTGATGAATTGCCTCAACTCATCAATGTGTTAAAAGGTGAAATGAGTTTTGT
TGGTCCTAGACCTAATTTGTTTAATCAAGAAGAATTAATACAAGAGCGTGATAGTCGTGGTGTCTATGAAGTATTACCAG
GGATTACTGGGTTGGCGCAAGTGAATAACATTGATATGTCTACCCCTAAGCTATTAGCAGAAACAGATCTTAAAATGATT
AAATCATTAACAATTAAAAATTATTTTAAATATATAATCCAAACAGCTACGGGTAGTGGCTCTGGTGATGCTGTCAGTTA
A

Protein sequence : 
MNHTFIRTLDFLMAFFGLIITFPILLVVTIIGYFDTGSPIFIQQRVGKNKKPFNLIKFRTMSVGTKSVASHLANTASITK
LGGFLRKTKVDELPQLINVLKGEMSFVGPRPNLFNQEELIQERDSRGVYEVLPGITGLAQVNNIDMSTPKLLAETDLKMI
KSLTIKNYFKYIIQTATGSGSGDAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-23 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SVI_1491 YP_003556240.1 galactosyl transferase VFG1309 Protein 9e-26 49
SVI_1491 YP_003556240.1 galactosyl transferase VFG1369 Protein 7e-21 42