Gene Information

Name : fliP (SVI_1442)
Accession : YP_003556191.1
Strain : Shewanella violacea DSS12
Genome accession: NC_014012
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1651429 - 1652175 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGAGATTGTCGTTTTCAATTATCTTGAGTTTATTGCTTATCTCTCCGGCCGCATTTGCCCTAGATGGAGTCTTACC
AGCCTTGACTGTGACCACTACTCCAGATGGTGGCACTCAGTACTCTGTGACTATGCAGATATTGCTGTTAATGACAGCAA
TGAGCTTTCTGCCAGCCATGATTATCATGCTGACCTCATTCACTCGCATCATAGTGGTCTTGTCTATTCTAAGACAAGCA
ATCGGTTTACAACAAACGCCGTCGAACCAAGTGCTTATTGGTATAAGTATGTTTATGACCTTCTTCATCATGGCGCCAGT
TTTTGATAAAATTTATGATGAAGCCGTTAAGCCTTATATTGCTGAAACCATGGATATTGAGCAGGCTTTCAATATAGGCA
AAGAACCGATTAAAACCTTTATGCTAGCCCAAACCCGGTTAACAGATCTCGACACATTCATCGAAATTTCGGGATATCAG
AATATAGATTCACCCGAAGATGTTCCTATGAGCGTATTAATTCCCTCATTTATCACCAGCGAGTTAAAGACTGCGTTTCA
GATAGGTTTTATGTTATTTGTGCCTTTCCTGGTGTTAGATCTTGTGGTGGCCAGTATCTTGATGGCAATGGGTATGATGA
TGTTATCTCCTATGATCGTCTCACTGCCCTTTAAGATCATGTTGTTTGTGCTCGTCGATGGCTGGAGCCTAGTAATGGGA
ACTCTTGCCAATAGCTTCGGTATCTAG

Protein sequence : 
MKRLSFSIILSLLLISPAAFALDGVLPALTVTTTPDGGTQYSVTMQILLLMTAMSFLPAMIIMLTSFTRIIVVLSILRQA
IGLQQTPSNQVLIGISMFMTFFIMAPVFDKIYDEAVKPYIAETMDIEQAFNIGKEPIKTFMLAQTRLTDLDTFIEISGYQ
NIDSPEDVPMSVLIPSFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWSLVMG
TLANSFGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-13 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-13 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-13 43
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 2e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003556191.1 flagellar biosynthetic protein FliP VFG1259 Protein 6e-54 63
fliP YP_003556191.1 flagellar biosynthetic protein FliP VFG2016 Protein 6e-49 59
fliP YP_003556191.1 flagellar biosynthetic protein FliP VFG2494 Protein 3e-52 59
fliP YP_003556191.1 flagellar biosynthetic protein FliP VFG2338 Protein 3e-46 52