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Name : Amico_0766 (Amico_0766) Accession : YP_003553623.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 800183 - 801781 bp Length : 1599 bp Strand : + Note : KEGG: bph:Bphy_3071 general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : TTGGTTGTTCTAAATTCAGAGAATATATGGCAAAAGTTTTATGCTCTTCTTTTGCAACATAAGGAATTTAAATTTTTTAT TGAGAAAAGAAGTACTTTTGAGATTAATATAAAAAAGCCTTTTCCACTTGCTCGCCTACTATTGCAACACTTTCCTGATA AAGAAGATGAAATCTTGTCTTGCATAAAAGCAGCGACGCAGATTCCGCAAGCTTATCTTCCCTTGTTTCCTATATTTATA AAAGGTACACAGTTTTTTTCTTTAAAAGAAATGAGTGCCTTAGGAATCATTCCCATTGCCTTTTCTGAGAAGGAGAAACT TTTGGCTATCGCTCTTTTTGACCCTTTCTTCTCCAGTGACTTGAAAAAAGGATTCAAAAAAACAGGAGTAAGGATAGTTC CCTTTTTATCACCACTTACGAGTATTCGCTCTTGCATTGACATGCTTCATCTTACCAATGCAGATGCTTATGACGCAGCC TTTCCCGCAAAGGATATTGTAGATTTTGTAGATCGTATAATTAATGAGGCCGCAAAAAATGGCGCTTCTGACATTCATAT AGAGGGGTTGTCGGCATGGAGCAGGGTAAGGTTTCGCATCGATGGATATTGTCGTGCTGTTTACTCCTTTTCATTGGATT TTCATCCTGCTATAATTTCGCGAATTAAGATAATGGCATCTATGGATATTTCTGATAAAAGGCGTCCTCAAGATGGCCAA TTTAACATAAAGACTGGTTCACAAGATTTTTTAGACGTACGTGTATCATCACTTCCTACCGTAGATGGCGAAAAAATTGC TTTGCGCCTCCTCGATTCTTCCAAAATTCCCGATAACATTTACCAATTAGGATTTGAGCAAAGAGACTTGGAACTTCTTG AAAAGCTTCTTTCTCAAAAGGAAGGGCTTATATTGGTGACTGGCCCCACAGGGAGTGGAAAGTCTACCACACTGCATGCG CTGATAAAGCAAGTAAACGCCCTTACTCTTAATGTGACGACCATTGAAGATCCGGTAGAGAGATTCCACGAAGGTATAAA TCAGGTTGAGGTCGATGAAAGGGCAGGTCGAACTTTTGAAGTGGTCTTGCGCTCGTTACTTCGCCAGGATCCAGATATTA TCCTTGTTGGAGAAATTCGAGATTCTGAAACTGCCCATCTTGTAATGCGGGCAGCACTTACTGGTCACCTGGTCCTTTCA ACTTTGCACACTGACGATGCGGCTAATGCTCCTTTAAGGCTCATAGAGATGGGAGTTCCGCCTTTCTTAATTGTCTCTTC ACTTAAAGCAGTTGTTTCCCAGCGACTTATTCGATTATTATGTCCTCTCTGTAAAAAACCGGATTCAAACAGTCCTGTGG GGTGCTCTTATTGTGGGGGGAGGGGATTTCACGGAAGGGTGGGGGTGTTTGAATATCTCCCTATAACTGAGAGAGTGCAA GAGCTTTTGCTTCACAAAGCCCCAGTTCAAAAGATACGTACTCAAGCACGCAAAGAAGGGATGAGAACTCTCGTAGAAAA TGGCATGCTTAAAGTTGAAAGGGGACTTACTACCTATGAAGAGATTTTAAGCATTTCTTCTGGAAGGACGGGGATTTAA Protein sequence : MVVLNSENIWQKFYALLLQHKEFKFFIEKRSTFEINIKKPFPLARLLLQHFPDKEDEILSCIKAATQIPQAYLPLFPIFI KGTQFFSLKEMSALGIIPIAFSEKEKLLAIALFDPFFSSDLKKGFKKTGVRIVPFLSPLTSIRSCIDMLHLTNADAYDAA FPAKDIVDFVDRIINEAAKNGASDIHIEGLSAWSRVRFRIDGYCRAVYSFSLDFHPAIISRIKIMASMDISDKRRPQDGQ FNIKTGSQDFLDVRVSSLPTVDGEKIALRLLDSSKIPDNIYQLGFEQRDLELLEKLLSQKEGLILVTGPTGSGKSTTLHA LIKQVNALTLNVTTIEDPVERFHEGINQVEVDERAGRTFEVVLRSLLRQDPDIILVGEIRDSETAHLVMRAALTGHLVLS TLHTDDAANAPLRLIEMGVPPFLIVSSLKAVVSQRLIRLLCPLCKKPDSNSPVGCSYCGGRGFHGRVGVFEYLPITERVQ ELLLHKAPVQKIRTQARKEGMRTLVENGMLKVERGLTTYEEILSISSGRTGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-52 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-52 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amico_0766 | YP_003553623.1 | type II secretion system protein E | VFG2426 | Protein | 9e-56 | 41 |
| Amico_0766 | YP_003553623.1 | type II secretion system protein E | VFG2048 | Protein | 2e-54 | 41 |
