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Name : Amico_0563 (Amico_0563) Accession : YP_003553423.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Virulence Product : ATPase AAA-2 domain-containing protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 588839 - 591331 bp Length : 2493 bp Strand : + Note : KEGG: CLPC; CLPC (HEAT SHOCK PROTEIN 93-V); ATP binding / ATPase; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART DNA sequence : ATGTGGCAGTTTTTTACGGAACGGGGCAAAAAAGTAGTTCAGCTTGCCCATAGAGAGGCTCTTCGGATGGGGCACGACGT AATCGGAACAGAGCATATCCTTCTTGGCCTTCTCGTAGAAGGAGAGGGTGTCGCTGCTCAGGTTCTCAATTCACTTGGCG TGAACTTTCAGGAAGTCCGTCGGCAAACAGAAGAACTCGTAGGAAAGGGACAGCCTATATTAAAGCCTATTGATCTTCCG TTGAGCCCACGAGCAAAACGAGTGCTTGATCTTGCCATTAAAGAAGCTCGGAATATGGGAGTTAACTATGTAGGCACAGA GCATGTGCTTCTCGGTCTCTTGGCCGAAGGGGAAGGTGTGGCAGCTCAGATCCTTCTGTCTTCAGGTGTAGATACTGTTA TTGTTCAGCGGGAAATAAGCCGTTTCATAGCAAATAACGAAGCAGATAGGGGGGTACAGCCAGATCTATCCGGCGAAGGG CAAAGGAGCCTGCACTCCAAGACCCCTACTCTCGATCAGCTAGGTATAGATCTTTCAGAAAAGAGTCGAAAAGACGAACT TGACCCCGTTATAGGCCGAGACAAAGAAATTCAGCGAGTGATACAAATTCTTGCCAGACGAACCAAAAACAACCCGGTCC TTCTTGGGGATCCTGGAGTAGGGAAAACTGCAATAGTGGAAGGACTGGCACAGAAGATTCAAGATGGTAATATTGCTGAA ATTTTGAGAGGGAAAAAAATAGTTCAGCTGAACATAGGAAATCTCGTAGCCGGAACAAAATACCGCGGCGAATTCGAAGA GAGGATGAGAAAGCTCTTAAAAGAACTTCGAGAAACAGGGGATGTTATCATCTTTATCGATGAGATTCACTCCATAATCG GTGCCGGTGGCGCAGAGGGAGCTGTGGATGCTGCCAATATACTCAAGCCAAGTTTATCGCGAGGTGAGTTTCAGGTCATT GGCGCTACTACATTAGATGAATATCGTAAATATATAGAAAAAGACGCAGCCCTTGAACGGCGCTTTCAGCCAGTAATGGT TGAGGAACCCTCGGTAGACGATACGATTAGCATACTTGAGGGACTCAGAGATCGATATGAGTCCCATCACAGGGTAAAGA TATCAGACGATGCCCTTGTCGCTGCCGCTCGCCTTTCATCAAGATATATTACAGAGCGTTTTCTTCCCGATAAGGCGATT GACCTGATCGATGAAGCAGCTGCCCGAGCTCGCTTGAAAACCATGGAGATTCCCGCAAATCTTAAAGATATAGAACATGA TCTTGAAGAGGTTCGAAAAGAAAAAGAGGCTGCCGTAACCTCTCAGGAATTTGAAAAAGCTGCTCGTTTACGAGATACTG AACGGAAGATATCGGAGGAACTCGAAGAGAAGAAAAAAGATTGGCAGTCCAGGCGATATCAAGAGAAACCTCTCGTTTCT TTTGATGATATTGCCACTATAGTGAGCGAGTGGACGAATATTCCAGTAACTCAGTTGACAGAAGAAGAAACCCAGCGACT GCTTAGGATGGAGGAAGAGATACATTGCCGGCTTATTGGCCAGGAAGAGGCGGTTAGTGCCGTTGCCAGAGCTATACGTA GAGCGAGGAGCGGCATGAAAGACCCCCGTCGTCCCGTGGGCAGTTTTCTTTTCTTAGGACCCACAGGCGTCGGTAAAACT GAGTTAGCCAGAAGATTGGCAGATTTTCTCTTTGGCAGCGAAGACGCCATGATCCGTCTTGACATGAGCGAGTTTATGGA ACGCCATGAAGTAGGAAAACTGATAGGGGCCCCTCCTGGGTATGTGGGGTACGATGAAGGTGGAAAGCTTACGGAGGCCA TTCGTCGACGTCCTTATTCAGTAGTGTTGTTTGATGAAATAGAAAAGGCCCATGAGGACGTTTTCAATATCTTGCTTCAA ATTCTGGAAGATGGTCGGCTTACAGATGGTCAGGGTCATACAGTTGACTTCAGGAATGCTGTTATTATTATGACCAGCAA TATTGGGGCCAAAGATTGGGTCAAAGGGACATCCCTTGGATTCTCAATATCAGGAGAAGCGGATGGTTATTTCGATTGGG ATAAAACTAAATCTGATATTTTGGATGCGGTGCAAAAAACATTTCGCCCTGAATTTATTAATCGAGTAGATGAGATGGTG GTTTTCAGGCCTCTGAGCAAAAAGGAAATGCTTGTTATCGTTGATATCATGTTATCCGACGTAAGGGAACGGTTGCGTTA TCAAGATATAGATATTAAGGTTAGCGAAGAGGCAAAAGCGTTTATTCTCGAAAAGGGTTATAACCCAAGATATGGTGCCA GACCCTTGCGGCGAAAAATTCAGCAGCTTATAGAAGACCGGATGGCAGACATGCTGCTTGAAGGCAAGATCAAGAAGGGA AGTCTCGTCTCTATTGATGAGGACAAAGGTGAAATGACTTTTGAGTGTACAAAACCTCAAAAAAGGAAAAAAGAAAAGAA GGCGGCGGTTTAG Protein sequence : MWQFFTERGKKVVQLAHREALRMGHDVIGTEHILLGLLVEGEGVAAQVLNSLGVNFQEVRRQTEELVGKGQPILKPIDLP LSPRAKRVLDLAIKEARNMGVNYVGTEHVLLGLLAEGEGVAAQILLSSGVDTVIVQREISRFIANNEADRGVQPDLSGEG QRSLHSKTPTLDQLGIDLSEKSRKDELDPVIGRDKEIQRVIQILARRTKNNPVLLGDPGVGKTAIVEGLAQKIQDGNIAE ILRGKKIVQLNIGNLVAGTKYRGEFEERMRKLLKELRETGDVIIFIDEIHSIIGAGGAEGAVDAANILKPSLSRGEFQVI GATTLDEYRKYIEKDAALERRFQPVMVEEPSVDDTISILEGLRDRYESHHRVKISDDALVAAARLSSRYITERFLPDKAI DLIDEAAARARLKTMEIPANLKDIEHDLEEVRKEKEAAVTSQEFEKAARLRDTERKISEELEEKKKDWQSRRYQEKPLVS FDDIATIVSEWTNIPVTQLTEEETQRLLRMEEEIHCRLIGQEEAVSAVARAIRRARSGMKDPRRPVGSFLFLGPTGVGKT ELARRLADFLFGSEDAMIRLDMSEFMERHEVGKLIGAPPGYVGYDEGGKLTEAIRRRPYSVVLFDEIEKAHEDVFNILLQ ILEDGRLTDGQGHTVDFRNAVIIMTSNIGAKDWVKGTSLGFSISGEADGYFDWDKTKSDILDAVQKTFRPEFINRVDEMV VFRPLSKKEMLVIVDIMLSDVRERLRYQDIDIKVSEEAKAFILEKGYNPRYGARPLRRKIQQLIEDRMADMLLEGKIKKG SLVSIDEDKGEMTFECTKPQKRKKEKKAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amico_0563 | YP_003553423.1 | ATPase AAA-2 domain-containing protein | VFG0079 | Protein | 0.0 | 56 |
| Amico_0563 | YP_003553423.1 | ATPase AAA-2 domain-containing protein | VFG0080 | Protein | 2e-154 | 51 |
