Gene Information

Name : Amico_0461 (Amico_0461)
Accession : YP_003553326.1
Strain : Aminobacterium colombiense DSM 12261
Genome accession: NC_014011
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.11
Position : 493761 - 494939 bp
Length : 1179 bp
Strand : +
Note : KEGG: cko:CKO_04984 hypothetical protein; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein

DNA sequence : 
ATGTCATACCGTTTTGATACTCAGTGTGTTCATTTGGGAACTCACCCTGATCCAATCACTGGAGCCCTTTCCACCCCTAT
TTACCAGACATCTACTTTCGCTTTCCATAACGCAGATGAAGGAGCTCGTAGGTTTAAGGGTGAGGAAGAGGGCTACATTT
ACACCCGCTTAGGAAATCCTAACCACACAGCCGTTGAAGAAAAGATAGCAGCCCTTGAAGGCGGGGAAGCCGCCGCGGTT
GCAGCGTCAGGCATGGGAGCCATTGCTTCTGTTATGTGGACTGCCCTTTCTGCTGGAGACCATGTTATCGCTGCTAAATC
TCTTTATGGATGTACTCACGCCCTGATGAACCACCAGTTCCCCCGTTTTGGCATGGAAGCTACCTTTATGGACTTAAAAG
ACCTTGCCGCAGTGAAAGCTGCTATGAGGCCCAATACCCGGATGATCTATTGCGAATCCCCAGCGAACCCCACCATGGAA
ATTGCCGATCTCGAGGGGCTGGCTCGCATCGCTCATGAAGGAAACGCCATTCTTGTAGTAGATAACACTTACTGTACTCC
TGTTATTCAGCGTCCTCTTGAGTTTGGGGCTGATGTGGTGGTCCATTCTGCTACAAAGTATCTCAATGGTCACGGAGACA
TTATCGCTGGAGTTATTGTGGGGAGTAAGGAGTTCATTGGGCGTATCAAACTGGAAGGGCTCAAAGATCTTACCGGGGCG
ACATTATCTCCCTTTGATTCCTATCTCTTGCTTCGTGGGATGAAGACCCTGCACATTCGTGTACCCAGACACTGCGAAAC
GGCTCTTAAAGTGGCTCGCTTCCTGAACGGTTGCCCTGAAGTAGAAAAGGTCTGGTATCCCGGCCTTGATGATTTTCCTC
AGAGAGAACTCGCCGATAAACAGATGAAATATTATGGAGCAATGATTGCTATGGAACTGAAAGGCGGATACGAGGCAGGG
AAGAAATTCATTAACAGCACAAAGCTCTGGACCTTGGCTGTAAGCCTTGGCGATGCGGAATCTCTTGTTCAGCACCCTGC
ATCTATGACCCATTCGGCTCTCAGCGATGAGGAGTTGGAAAAAGCTGGCATCTCAAAGGGACTGGTTCGGCTTTCAGTAG
GTCTTGAAGATGTTGAGGACCTGATTGACGATCTGAAAGAGGCTTTTGCTGTTATGTAA

Protein sequence : 
MSYRFDTQCVHLGTHPDPITGALSTPIYQTSTFAFHNADEGARRFKGEEEGYIYTRLGNPNHTAVEEKIAALEGGEAAAV
AASGMGAIASVMWTALSAGDHVIAAKSLYGCTHALMNHQFPRFGMEATFMDLKDLAAVKAAMRPNTRMIYCESPANPTME
IADLEGLARIAHEGNAILVVDNTYCTPVIQRPLEFGADVVVHSATKYLNGHGDIIAGVIVGSKEFIGRIKLEGLKDLTGA
TLSPFDSYLLLRGMKTLHIRVPRHCETALKVARFLNGCPEVEKVWYPGLDDFPQRELADKQMKYYGAMIAMELKGGYEAG
KKFINSTKLWTLAVSLGDAESLVQHPASMTHSALSDEELEKAGISKGLVRLSVGLEDVEDLIDDLKEAFAVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amico_0461 YP_003553326.1 methionine gamma-lyase BAC0207 Protein 2e-90 56