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Name : Amico_0449 (Amico_0449) Accession : YP_003553314.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Unknown Product : N-6 DNA methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 479467 - 480948 bp Length : 1482 bp Strand : + Note : PFAM: N-6 DNA methylase; KEGG: afr:AFE_2793 type I restriction-modification system, M subunit DNA sequence : ATGTCTGTGAACTTGGAATTTGAAGATAAATTATGGGAAATGGCAGATAAACTGCGAGGCAATATTCAGCCTTCAGATTA TAAGGATGTTGTTCTTGGTCTTATCTTTTTGAAATATATCTCTGATAGTTTTGAAGAAAAATACAACGAACTGGTAGCAG AAGAAGAAGGTTTCGAAGAAGACAGAGATGCCTACGTAGCAGAAAACATTTTTTATGTTCCACCCAGCGCCAGGTGGGAT TTTATTAAAAAGAATGCGAAACAGAGCACCATTGGACAAATTATAGATGATGCCATGATAACTATTGAACGAGAAAATAG AAACCTAAAAGGAGTCCTTCCCAAAAATTACGCGAGGCCTGAGCTTGATAAAGCAAAATTAGGAGAGCTCGTTGATTTGT TTTCCTTCAACCTCGGAAACAAAGAAGCCAAAGCTCAAGATATTCTAGGCAGGGTATATGAGTATTTCTTAGGGAAATTC GGTTCCAGCGAAGGTGAATTTTATACGCCGCCTAGCATCGTAAAACTTCTAGTTGGCATGATTGAACCGTATAAAGGAAG AGTTTATGACCCTTGTTGCGGTTCTGGCGGCATGTTTGTGCAGTCATCCCGTTTTGTTGAAGAGCACCAGGGGCGAAAAG ATGATATCCACATCTTCGGTCAAGAATATACGGCTACGACCTGGAGACTTTGCAAAATGAATCTGGCTATCAGGGGAATT GATGGAAATCTTGGAGCGCGAGACGCAGATACATTTGGAAATGATCTGCATAAAAATATAAGAGCCGATTATATCTTGGC TAATCCTCCTTTTAATGTTAGCGATTACACCTTAATTCCAGATGATGCCCGTTGGAAATATGGAATTCCGCCAGAAAAGA ACGCCAACTACGCCTGGATTGAACATATTATCAGCAAACTTTCTCCTACCGGAGTGGCGGGCTTTGTCTTGGCTAACGGA TCTATGAGTACAACCACTAAAGCCGAAGCGGAAATAAGAAAGAACATCATAGAAGCAGGACTTGTAGATTGCATTGTTAC TATGCCACCAAACCTTTTTTACAATGTAACCATTCCTGTTTGTCTGTGGTTTATCTCTAAAAAGCGAGAAAACAAGCAAG ATAAAATTCTCTTTATTGATGCTCGTAAAATGGGAACAATGGTTACCCGCAAGCATAGAGAATTTTCTGATGGAGAAATA GCAAAGATCTACGACACCTACCACAACTGGCGCGATAATAAAAAAGAATATAAAGACATACAGGGTTTTTGCAAATCTGC CGATATTGAAGAAGTAAGAGAGCACGAATATATACTGACTCCTGGCCGATATGTGGGCATAGAAGAAGTGGAAGACGACG GCGAACCCTTCGAAGAGAAGATGACGCGGCTAACAGGTGAACTGGCAGAGATGTTCGCTAAATCCCACAAACTAGAAGAA GAGATCAAGCAGCGATTAGGAGCGATTGGTTATGAGTTCTAA Protein sequence : MSVNLEFEDKLWEMADKLRGNIQPSDYKDVVLGLIFLKYISDSFEEKYNELVAEEEGFEEDRDAYVAENIFYVPPSARWD FIKKNAKQSTIGQIIDDAMITIERENRNLKGVLPKNYARPELDKAKLGELVDLFSFNLGNKEAKAQDILGRVYEYFLGKF GSSEGEFYTPPSIVKLLVGMIEPYKGRVYDPCCGSGGMFVQSSRFVEEHQGRKDDIHIFGQEYTATTWRLCKMNLAIRGI DGNLGARDADTFGNDLHKNIRADYILANPPFNVSDYTLIPDDARWKYGIPPEKNANYAWIEHIISKLSPTGVAGFVLANG SMSTTTKAEAEIRKNIIEAGLVDCIVTMPPNLFYNVTIPVCLWFISKKRENKQDKILFIDARKMGTMVTRKHREFSDGEI AKIYDTYHNWRDNKKEYKDIQGFCKSADIEEVREHEYILTPGRYVGIEEVEDDGEPFEEKMTRLTGELAEMFAKSHKLEE EIKQRLGAIGYEF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 3e-161 | 65 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 3e-160 | 64 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 2e-160 | 64 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 3e-107 | 43 |
