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Name : Amico_0398 (Amico_0398) Accession : YP_003553265.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Resistance Product : acriflavin resistance protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 426747 - 429791 bp Length : 3045 bp Strand : + Note : PFAM: acriflavin resistance protein; KEGG: vsp:VS_1986 cation/multidrug efflux pump DNA sequence : ATGAATATTGCAGAATATTCAATTCAAAAGAGATACGTGACGTGGTTTTTTACAGTTTTTTTGATTATAGGTGGAGTTTT TGCCTATAAAGGATTAGGAAAACTGGAAGATCCTGCCTTTACTATTAAGACCGCAGTAGTTACCACTGCTTATCCAGGAG CTACGCCAAAAGAAGTGGAGGAAGAGGTAACGGAAGTTATAGAACGGGCTGCTCAACAGATGGGACAAGTGGATAAGGTC CGGTCTCTTTCTCAGGAAGGCGTTTCTCTTGTGTATGTAGATATTAAAGATACGTATACAGCAAAAGATTTGCCTCAAAT ATGGGACGAGTTACGACGGAAAATAAATGATGTTCAAGAGCATTTGCCACCAGGAACAAGTCGTTCTTTAGTTAACGATG ACTACGGAGATGTATATGGAGTTTATTTTGCCCTTACTGGCGAAGGATATTCTTACAGAGAACTTGAAGATTTTGCCGAT TATCTGCGTAGGGAGTTGCTCCTTGTTCCTGGGGTTGCAAGTGTTGAAGTGACAGGCATACAAAAAGAGGCTATTTATGT AGAAATTTCCAGAACGAAACTTAGTCAGCTCGGTATCTCTATGGGAGAACTTTTTCAAGTTCTCAAAGCTCAGAATTTCG TGGTTCCATCGGGGAAAGTGAGAGCGGGGGCAGAGTATATTCGCATAACTCCAACTGGGGAGTTTTCTTCTGTCGAACAA GTAGGGGCGTTACTTCTTGCATCTTCCTCGAGGGTGCTGATCCGTTTAGATGACATAGCTACAGTTACTCGTAATTATAT AGAGCCGACACGGGCAATTATGCGTTATAACGGAAGTCCTGCTGTTGGAATCGGTATCTCCAACGTAGAAGGTGGCAACG TTATTGCTATGGGAGAAGCCATAAAGAAGCGGCTCAAGGAACTAGAGCCGCAGACTCCTATCGGCATGAATTTAGGGCTT ATTTACTACCAGTCGGATACAGTTCAAAAGGCAATTAATAACTTTTTATTAAATCTTCTGGAAGCTCTGAGTATAGTTAT TGCCATATTACTTATATTTATGGGTTTCCGCAGTGGGATGCTTATTGGCGGGGTATTGTTGCTTACAATTTTTGCCACTT TTATCGCAATGAAACTTGTGAGGATAGATCTTCATAGTATTTCTCTTGGAGCATTGATTGTAGCTTTGGGAATGCTAGTG GACAACGCCATCGTTGTTGCTGATGGCCTTCTTGTGCGGATACAAAGTGGTGAGGATAGAATATCTTCTGCCGTGGGTGT TGTGACTCAAACTCAATGGCCTTTGTTGGGAGCTACTTTTATTGCTGTTATAGCTTTTGCTCCTATTGGCCTGTCCCCAG ATAGCACAGGGGAGTTTTGCCAAAGCCTTTTTCAGGTGGTGGGGATTTCCTTGATTATAAGTTGGGTGCTTGCCGTTACC GTTACTCCTGTAGCCGGTGTGCGTTTTTTAAAAACTTCAGCAAAAGCAGAAATTCCCTACGATACAAAACTTTATAGGGT GTATAGAAGATTTCTCAAGGCGTGTATTCGTAAGAGAAAGGTAACAATATTGGTTATGGTTTGTTTGCTTGGTTCTGCTC TCATAGGCTTTACGTTTGTGGATCAATCTTTTTTCCCAAGCTCCTCAAGCCCCCTTTTTACAGTGGAATTTTGGCGTCCT CGGGGTGCTTATATAGAAGAGACCCAGAGAGAGGTAGAAAAAGTTGAAGCTTTTATTTTGAAACAGCCAGAGACAGTTTC TGTAGCAAGCTACGTGGGACAGGGAGCCCTTCGTTTTATTCTCACCTATACGCCAAGTGATTCTTCTGATAGTTATGGAC ACTTGATAGTGGAAGCTAAGGATTTGAAATCAGCAGAGTCTTTACGTCGTAAACTGGGAAATTTCATGAATATAGAAATG CCAGATATCGACCCCAGGGTTCGTTCCTTTAGTAAAGGAACAGGGGGAGGTGCAAAAATACAGGCGAGGTTTACGGGGGA CGATCCTCGTGTTTTACGACGTCTAGGAGAAGAAGCTTTTTATATGATGAGGAACGCCCCCGATTCGATGAACATCCGGA GCGACTGGGGAGAAAGGGTCAAGGTTATTCGTCCCGTACTTGATGAGGTGCGAACCCGACAAGCTGGTTTAACACGGCAA GATGTAGCATCGGCCCTTGAGATGTCCTTTTCGGGTATACAAGCAGGCTTATACAGAGAGAGGGATAAACTCCTCCCTAT TATAGCTAGATTGCCTAAAGCGGATAGGGCGAGACTGGGGGCACTTCCAGAAGTAGAAGTGTGGAGCCCCCTTATGAGAA AATATATAGCCTTAACTCAGATTACAAAAAGCATTGATACCATAGCTGAAGACCCCGTTATTTATAGGCGAAATCGTATG AGGACTTTTTCTGTAGAGTGTGATTCCCGTTCTGGGAAAACAGGTCTTTTATTTGCTCGTATAAAGCCCGAACTGGAAAA TATTTCTCTTCCTTTAGGATATAGCCTCAGTAGGGGAGGCGAGTATGAAAGTTCTCAAAAAGCTCAAGGTGGACTTGTGG GGATGATTCCTATTGCTTTTTTAGCCATGGTCGCTATATTAGTTGTTCTTTTTAACGGGTTTAAACAACCCATTATGATC CTTCTTTGTCTCCCCTTGTCCATTATTGGTGTAACGGCGGGATTACTTCTTTTTCATAAATCTTTTGACTTTATGGCTCT CCTGGGATTCTTGAGCCTTGCTGGCATGCTCATAAAAAATGCCATTGTGCTTATTGATCAGATCGATCTCGAAATACGGG AAGGAAAAGAGGGCTTTTCAGCTATAGTGGATTCGGCTATGAGTCGTGCTCGTCCTGTTCTTATGGCAGCTATTACCACG GTTTTAGGTATGATCCCTCTTTATTTTGATATTCTCTTTTCTGCTCTGGCAGTTACTATTATGTTTGGCTTGGCTTTTGC CACGGTTTTGACGTTAATTATCGTACCAGTTCTTTACTCTGTTTTTTTAAAAATTCCTGTTTTTAAAGACGAAAATGTTA GGTAG Protein sequence : MNIAEYSIQKRYVTWFFTVFLIIGGVFAYKGLGKLEDPAFTIKTAVVTTAYPGATPKEVEEEVTEVIERAAQQMGQVDKV RSLSQEGVSLVYVDIKDTYTAKDLPQIWDELRRKINDVQEHLPPGTSRSLVNDDYGDVYGVYFALTGEGYSYRELEDFAD YLRRELLLVPGVASVEVTGIQKEAIYVEISRTKLSQLGISMGELFQVLKAQNFVVPSGKVRAGAEYIRITPTGEFSSVEQ VGALLLASSSRVLIRLDDIATVTRNYIEPTRAIMRYNGSPAVGIGISNVEGGNVIAMGEAIKKRLKELEPQTPIGMNLGL IYYQSDTVQKAINNFLLNLLEALSIVIAILLIFMGFRSGMLIGGVLLLTIFATFIAMKLVRIDLHSISLGALIVALGMLV DNAIVVADGLLVRIQSGEDRISSAVGVVTQTQWPLLGATFIAVIAFAPIGLSPDSTGEFCQSLFQVVGISLIISWVLAVT VTPVAGVRFLKTSAKAEIPYDTKLYRVYRRFLKACIRKRKVTILVMVCLLGSALIGFTFVDQSFFPSSSSPLFTVEFWRP RGAYIEETQREVEKVEAFILKQPETVSVASYVGQGALRFILTYTPSDSSDSYGHLIVEAKDLKSAESLRRKLGNFMNIEM PDIDPRVRSFSKGTGGGAKIQARFTGDDPRVLRRLGEEAFYMMRNAPDSMNIRSDWGERVKVIRPVLDEVRTRQAGLTRQ DVASALEMSFSGIQAGLYRERDKLLPIIARLPKADRARLGALPEVEVWSPLMRKYIALTQITKSIDTIAEDPVIYRRNRM RTFSVECDSRSGKTGLLFARIKPELENISLPLGYSLSRGGEYESSQKAQGGLVGMIPIAFLAMVAILVVLFNGFKQPIMI LLCLPLSIIGVTAGLLLFHKSFDFMALLGFLSLAGMLIKNAIVLIDQIDLEIREGKEGFSAIVDSAMSRARPVLMAAITT VLGMIPLYFDILFSALAVTIMFGLAFATVLTLIIVPVLYSVFLKIPVFKDENVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amico_0398 | YP_003553265.1 | acriflavin resistance protein | BAC0519 | Protein | 0.0 | 48 |
| Amico_0398 | YP_003553265.1 | acriflavin resistance protein | BAC0428 | Protein | 0.0 | 48 |
| Amico_0398 | YP_003553265.1 | acriflavin resistance protein | BAC0526 | Protein | 0.0 | 46 |
| Amico_0398 | YP_003553265.1 | acriflavin resistance protein | BAC0425 | Protein | 0.0 | 44 |
