Gene Information

Name : Amico_0033 (Amico_0033)
Accession : YP_003552906.1
Strain : Aminobacterium colombiense DSM 12261
Genome accession: NC_014011
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 28494 - 29414 bp
Length : 921 bp
Strand : -
Note : KEGG: swd:Swoo_1847 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
TTGATCCATACAACGAAAGCCTCAAAAGCATTAGAAATAAAAGACCTGTGGAAGGTCTATACAAAAAAGGATATTGACAT
AGACGTTGAAAATGGTGATCTCATTACAGAGCTCGATAAATCTGAAGATGCTGTTGTAGCAGTAAGGGGCGTTTCTCTTG
CAGCCCGTCAAGGCGAGGTTTTCGTTATTATGGGACTTTCGGGAAGCGGAAAGTCTACACTGATTCGATGCGTTATTCGC
CTTATTGAACCTACATCTGGAGAAATATGGGTCAATGGGCAAGAAGTAAGCTCTCTCCCTAAAAAAGATCTGACAGAGTT
TCGACGCAAACAGATAGCCATGGTTTTTCAGCATTACGGTCTGTTGCCCCATAAAACCATTATAGATAACGTGGAGTTCG
GACTTAAACTTCAAGGGATATCAGAAAAAGAACGGCGAGAACGATCAAACGTCGCTCTCGAGAGAGTTGGCCTTAAAGGG
TGGGAGAACTATTATCCCAGCTCCCTCAGCGGTGGGATGAGGCAACGGGTAGGCATAGCCAGGGCTCTTGTGATGGATAC
GCCTATCCTTCTCATGGATGAGCCGTTCAGTGGCCTTGACCCTCTGATCCGTCGTGAAATGCAGGATGAATTGATCCGCC
TGCAAAAAGAATTGAAGAAGACAATTTTCTTTGTTACCCACGACCTTGATGAAGCCATGCGCATGGGAGACCGAATGGCC
GTCATGAAAAACGGAACCATCGTCCAAATGGGAGCTCCCGCTCAAATCCTTGCCAACCCAGCTGACGAGTATGTGGCCCG
TTTTGTTCAGGATAAACGGCGTCAGATCCAGATGGCTGATGAAGGCGCATTTGTTAACGGGGAAAGCATGGATGAAATAC
CTGGCGAAGGAGTGATGGATCATATTTCCAGAGAATCTTGA

Protein sequence : 
MIHTTKASKALEIKDLWKVYTKKDIDIDVENGDLITELDKSEDAVVAVRGVSLAARQGEVFVIMGLSGSGKSTLIRCVIR
LIEPTSGEIWVNGQEVSSLPKKDLTEFRRKQIAMVFQHYGLLPHKTIIDNVEFGLKLQGISEKERRERSNVALERVGLKG
WENYYPSSLSGGMRQRVGIARALVMDTPILLMDEPFSGLDPLIRREMQDELIRLQKELKKTIFFVTHDLDEAMRMGDRMA
VMKNGTIVQMGAPAQILANPADEYVARFVQDKRRQIQMADEGAFVNGESMDEIPGEGVMDHISRES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-39 46
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-39 46