Name : Amico_0294 (Amico_0294) Accession : YP_003553163.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 313384 - 314166 bp Length : 783 bp Strand : + Note : TIGRFAM: ribonuclease PH; KEGG: ppd:Ppro_2311 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 DNA sequence : ATGGAAGACACTCTTCTTCGAAGTGACGGCAGAAAGTTCAATGAAATACGTCCCATCAGCTTCCAGCGTCACTTTACCTG TTATGCCGAAGGGGCAGTGTTAGCCTGCTTTGGTGATACGAAAGTCATTTGCACGGCGTCTGTGGAAGACAGGGTTCCTC CTTTTCTGAGGGGGTCTGGCCAGGGGTGGATAAGCGCAGAATACGCTATGTTGCCTCGTGCTACAGCAGAGAGGACATCA CGGATGACCTCAAAAGGAGCGATTAGCGGGAGAAGTCATGAGATACAGCGCCTTATTGGCCGCTCTCTTCGAGCCTCCGC GGATCTTTCTCTTCTGGGAGAGAGAACCATATGGCTTGACTGCGATGTTATCCAGGCAGATGGTGGAACGCGTACAGCAG CCATATCCGGAGCCTTTGTAGCCCTATTCGACGCTATGCGGTGCCTGAAAGCCCAGGACGTGATAGAGAAAATTCCGGTA AAGTCTTTTGTGGCCGCCGTCAGTGTAGGGAAAATAGAAGGAAGCCTTCTTCTTGATCTTTGTTACGAAGAAGACAGCTG CGCTGATGTAGACTGCAATGTGGTGATGAACGGGGACAAACAGCTTATTGAAATACAGGGCACAGGGGAGCGGGGGACTT TTGCCAGGGATGAATTCGACGCTATGCTCGATCTGGCTGAAGATGGAATTCAAACTATAATGTTCAGTCAAGCTGAGGTT CTTCAGATTAGCGAGGAGGAACGACATGCTTGCGTCGGGAAAATCTGTAGTTTTTGCAAGTAG Protein sequence : MEDTLLRSDGRKFNEIRPISFQRHFTCYAEGAVLACFGDTKVICTASVEDRVPPFLRGSGQGWISAEYAMLPRATAERTS RMTSKGAISGRSHEIQRLIGRSLRASADLSLLGERTIWLDCDVIQADGGTRTAAISGAFVALFDAMRCLKAQDVIEKIPV KSFVAAVSVGKIEGSLLLDLCYEEDSCADVDCNVVMNGDKQLIEIQGTGERGTFARDEFDAMLDLAEDGIQTIMFSQAEV LQISEEERHACVGKICSFCK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-52 | 58 |