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Name : Amico_1674 (Amico_1674) Accession : YP_003554514.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1716411 - 1717685 bp Length : 1275 bp Strand : - Note : KEGG: plu:plu0174 hypothetical protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit DNA sequence : ATGGTAGTTTTGTTAGCATTTCTTGGTTCTTTGTTGGGGTTGACTATTCTTGGCGTTCCCATCGGATTTGGAATAGGCCT TTCCGCATTGGCCCTTATGTTTGTGACGGGAACTTTTGAGCCTATGGTTCTCGCTCGACGTATGATTACCGGTGTTGATG TCTATACACTTTTGGCTATCCCATTTTTCATGCTGGCCGGCGAAATAATGAACAAAGCGGGACTTGTCAACGATATTTTG CTCTTTGCCAACGCTCTCGTTGGTCGGGTAAAAGGTGGGCTTGCCTACGTTAATGTAGTTGCCAGCATGCTTTTTGCGGG AATTAGTGGTTCTGCAGTTGCTGACGCTGCCGCATTGGGCTCTCTTGAGATTCCCATGATGGAAAAAGGCGGGTATGACA AAGAATTCTCTGCGGCTATCACTGCTGCTTCTTCTGTTATTGGCCCAATTATTCCACCCAGCGTTCCCATGATCATTCTT GGGTCTATTGCTCAGATTTCTATTGCTAAGCTCTTTCTTGGCGGCGCGATTCCAGGAATTCTTATAGGAATTGCCCTTCT AGCTGTTTCTTATTTCATAGCTCGCAAAAATAATTACCCTGTGGGTGATCGAGTAGGTTTTGGAGAGTTTTTGGGGATTT TCAGAAAAACAGTTTGGGCATTAATTCTCCCCGTTATTATCTTGGGAGGCATTCTCGGCGGTATTTTTACAGCCACAGAA GCCGGAGCGGTCGCTGTTGTCTATGCTATTATTGTGTCATATTTCCTATATGATGTGAGATGGTCTGACTATCCGGAAAT ACTCAAAGGTGCTTCCCTTAATACAGGAGTAGTCATGTTGGTGTGCGCATCAGCTATGGCGTTGACGTGGTTTCTCGCTG TGGCCCAGGTTCCCCAGCTTCTTACCGAAGTGATTATGAGCATTACTAAAAACAAGCTCATGTTTCTTCTTATCCTGAAC GTTCTGCTTTTCCTTGTGGGGATGGTAATTGACTTGACCCCAGCTCTTTTTCTTCTTGTTCCGATTCTCCTTCCTGTATG CAGAAGTTACGGGATTGACGATATACACTTTGGCGTCATTATGGTAACGAACCTTTGTGTCGGACTCATCACACCGCCGG TAGGGACAGTCCTTTATGTGACAAACTCCATATCAAAAGTGTCCCTGATATCATTGGTTCGATCTCTTGTTCCCATGTAC GTAGCTCTTTTTATCGTTGTGATGCTCGTAACATATGTTCCACAAATCGTGTTGTGGCTGCCCTCTTTAATGTAA Protein sequence : MVVLLAFLGSLLGLTILGVPIGFGIGLSALALMFVTGTFEPMVLARRMITGVDVYTLLAIPFFMLAGEIMNKAGLVNDIL LFANALVGRVKGGLAYVNVVASMLFAGISGSAVADAAALGSLEIPMMEKGGYDKEFSAAITAASSVIGPIIPPSVPMIIL GSIAQISIAKLFLGGAIPGILIGIALLAVSYFIARKNNYPVGDRVGFGEFLGIFRKTVWALILPVIILGGILGGIFTATE AGAVAVVYAIIVSYFLYDVRWSDYPEILKGASLNTGVVMLVCASAMALTWFLAVAQVPQLLTEVIMSITKNKLMFLLILN VLLFLVGMVIDLTPALFLLVPILLPVCRSYGIDDIHFGVIMVTNLCVGLITPPVGTVLYVTNSISKVSLISLVRSLVPMY VALFIVVMLVTYVPQIVLWLPSLM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-41 | 43 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-41 | 43 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 1e-41 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amico_1674 | YP_003554514.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 7e-42 | 43 |
