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Name : Amico_1586 (Amico_1586) Accession : YP_003554426.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1623789 - 1625090 bp Length : 1302 bp Strand : - Note : KEGG: dat:HRM2_45580 DctM10; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit DNA sequence : ATGATGACTGAAATTCTTAAAGACCCCGCTTTGTGGGCGCTTATTATTTTTGTAATACCCCTTTTGCTCAAGTTTCCAAT AGCAGTGGCCCTTGGGGGATCGGCCCTTTTTGTATCGTGGCATTGGAGCCTGGGGCACCAAATGATTTCCTATAACTTTT ATGCCGGCATAGCTAAATTCCCCCTTCTGGCCATTCCTTTCTTTATTTTAGCTGGGGTCATTATGGAAAAAGCTGGCATT GCGGTGCGGATCATCAATCTTATAAAGGAACTGGTAGGCTCCGTCACGGGAGGACTCGCGATAGCGACTGTAGGGGTGGC CACCTTCTGGGGAGCGGTCAGCGGCTCTGGCCCAGCAACTGTTGCTGCCCTCGGGTTGATCCTTATCCCCGGAATGGCGG CTGCCGGATACGATAAGGCTTTTTCTGCCGCTGTAGTGTCTGTTTCTTCTGGTCTGGCAATAGTCATTCCGCCAAGCATA GCATTTATTGTGTACGGCGTTGTTACAGAGACGTCAGTCAGCGCTCTTTTTGCGGCTGGTGTTTTCCCGGGTATAGTGGT GGCTCTATTTTTAATGCTTTTTGTTTATTTTATAAGTAAAAAACACGGATATCACGGAGAGCCCCGTGGGGGGAGAGAAA AGCTCTTAAAAGCATTTAAAGAATCATTTTGGGGTTTGTTGACTCCGGTTATTATCCTTGGAGGAATCTACGGAGGTATT TTTACTCCCACGGAAGCCGCGGCTGTCGCTGTTTTTTATGGTCTCTTTGTGGGTGTTTTTGTCTATAGAACCATAACTGT GAGAGTTATGTACGAAATTCTTGTTTCAAGTGTTATCTCCACTGCCGTTGTCATGATCGTCGTTACCTGTGCCGGTCTCT TCTCATGGGTAGGTGCCACAGTAGGGCTTATTGATAAGGCTGCGGATCTCCTTCTAAACCTTTCTGGTAACCCTATGGTT ATTTTGTTGCTTATCAATGTTATTTTGCTTTTGGCGGGAATGGTTCTCGATGCCATTTCTATCTACTACGTTTTTCTTCC CATTCTCATACCTATTATGGCTCACTTTGGATGGGATCCTATCTGGTTTGGCGTCGTAATGACGGTTAACCTCGCTATAG GGCAGGTGACACCTCCTGTAGCTGTCAACTTGTATGTGGGAGCCAATATCAGTAAACTCTCTATGGAAGATATCAGTAAA CCTGCAATGCCTCTGGTGTTAGCATCCATATTGGCCCTAATTGTAATTACGCTGTTCCCCACGATCTCTACGTTCTTGCC TAAAGCTTTTAATCTTTATTAA Protein sequence : MMTEILKDPALWALIIFVIPLLLKFPIAVALGGSALFVSWHWSLGHQMISYNFYAGIAKFPLLAIPFFILAGVIMEKAGI AVRIINLIKELVGSVTGGLAIATVGVATFWGAVSGSGPATVAALGLILIPGMAAAGYDKAFSAAVVSVSSGLAIVIPPSI AFIVYGVVTETSVSALFAAGVFPGIVVALFLMLFVYFISKKHGYHGEPRGGREKLLKAFKESFWGLLTPVIILGGIYGGI FTPTEAAAVAVFYGLFVGVFVYRTITVRVMYEILVSSVISTAVVMIVVTCAGLFSWVGATVGLIDKAADLLLNLSGNPMV ILLLINVILLLAGMVLDAISIYYVFLPILIPIMAHFGWDPIWFGVVMTVNLAIGQVTPPVAVNLYVGANISKLSMEDISK PAMPLVLASILALIVITLFPTISTFLPKAFNLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 8e-47 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 6e-47 | 41 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 8e-47 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amico_1586 | YP_003554426.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 3e-47 | 41 |
