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Name : Amico_1376 (Amico_1376) Accession : YP_003554217.1 Strain : Aminobacterium colombiense DSM 12261 Genome accession: NC_014011 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1405573 - 1407093 bp Length : 1521 bp Strand : - Note : KEGG: lysine--tRNA ligase class II, chloroplast or mitochondrial ; K04567 lysyl-tRNA synthetase, class II; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : GTGTCGGCCAACTTAGAAATCAAAACAGAAGAAATTGCTCTGCCAGAGGAAGAAATTTTTCGTCAAAGAAAAGAAAAACT GGCAAGGCTAAGAGAAGAGGAGGGCTATGATCCTTTCCTTATAGAGCGATGGGAGCGGTCAGATCTATTGAATGATGTTC GCCAACGCTTTGATCATCTTGAAATAGATGAAGCAGATGAGGATGCAATCCTTTCTGTAGCAGGCCGTGTAATGACCCTC CGCAAACACGGAAAGGCCATGTTTGCGAACCTCCAGGACGAAACAGATACCATGCAGCTTTATTTCCAGCTTAATGCCAT GGGAGAAGAAGCTTATGACTTCGCGAAAAAATGGGTGGATAACGGAGATTTTGTTGGCGTTGTCGGCATCCCCTTCAGAA CAAGGCGGGGTGAGCTCACAATTCTCGTAAAGGAGAGCACCCTTCTTTCCAAGGTCCTCCGTCCTCTTCCGGAAAAATGG CATGGACTGAAAGACACAGAGGTTCGCTATCGTCAACGGTATCTCGATTTAATGGTTAACACTGATGTAAGGGATACTTT CAGAAAGAGATCCGATATTATTGCTTCTATGAGAAAGACCCTTATAGATCATGGGACTCTGGAAGTTGAAACGCCCATTC TTTCTTTTTTGGCTGGAGGAGCGAATGCCCGTCCCTTCCAGACCTACCATAATGCCCTTGATGCGAACATGTACCTTCGC ATTGCTACGGAGCTATACCTCAAACGTCTTGTGGTGGGGATGTTTGGCCGAGTCTTTGAAATTGGCAAAAACTTTAGGAA CGAAGGCATTGACACGATGCACAATCCTGAGTTTACTCTCATGGAAGTATATTGGGCCTACGCTGATTACTCCGACATGA TGGATCTTACTGAAGAGCTCGTTCGAAATGCGGCGTTGGCAGTTGATGGTCTTGTTGTCAATTATCAGGGAATCGAGCTT GATTTCAGCAAACCCTTCCGCAGGGTGTCCATGCTCAACCTTGTTAAAGAGTATACGGGAATAGACTTTAAAACCATAAA GACTGATGAAGAAGCGCGGAAAATTGCCAATGAAAAGGGAGTGGAGCTCAAGGGCTCGGAGAGCCGGTTTGCAGTACTGA ACGAAGTTTTCGAAGCCTACGTAGAAGATAAACTTGTGCAACCTACGTTTGTTATAGGTCACCCCACAGAGATTTCCCCT CTGGCGAAGAGAGATCCTGAAGATCCTGATTACACCCATCGTTTTGAGCTTTTTATTTGTGGTTCAGAAGTGGCAAATGC CTATAGCGAACTGAACGACCCCCTCGATCAGAGAGAGCGTTTCCTTGACCAGCTTCGTAAAAAAGAAGCGGGAGATGAGG AGGCCCACGTTTTCGATGAGGACTTCATTAACGCAATTGAATGCGGCTTGCCTCCTACAGGGGGACTTGGCATAGGGATT GACCGTCTTGTCATGTTCTTAACGGACTCCCGCTCAATACGAGACGTCATTCTCTTCCCAGCCATGCGTCCAAAAGCGTA A Protein sequence : MSANLEIKTEEIALPEEEIFRQRKEKLARLREEEGYDPFLIERWERSDLLNDVRQRFDHLEIDEADEDAILSVAGRVMTL RKHGKAMFANLQDETDTMQLYFQLNAMGEEAYDFAKKWVDNGDFVGVVGIPFRTRRGELTILVKESTLLSKVLRPLPEKW HGLKDTEVRYRQRYLDLMVNTDVRDTFRKRSDIIASMRKTLIDHGTLEVETPILSFLAGGANARPFQTYHNALDANMYLR IATELYLKRLVVGMFGRVFEIGKNFRNEGIDTMHNPEFTLMEVYWAYADYSDMMDLTEELVRNAALAVDGLVVNYQGIEL DFSKPFRRVSMLNLVKEYTGIDFKTIKTDEEARKIANEKGVELKGSESRFAVLNEVFEAYVEDKLVQPTFVIGHPTEISP LAKRDPEDPDYTHRFELFICGSEVANAYSELNDPLDQRERFLDQLRKKEAGDEEAHVFDEDFINAIECGLPPTGGLGIGI DRLVMFLTDSRSIRDVILFPAMRPKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-93 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amico_1376 | YP_003554217.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-93 | 47 |
