Gene Information

Name : Amico_1329 (Amico_1329)
Accession : YP_003554171.1
Strain : Aminobacterium colombiense DSM 12261
Genome accession: NC_014011
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1352133 - 1352831 bp
Length : 699 bp
Strand : -
Note : KEGG: dps:DP1784 lipoprotein releasing system, ATP- binding protein (LolD); PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCCGATAGTGAATATAAAAGAGCTGACAAAGAGGTATCCTATGGGGGATCATACGTTTACGGCTCTCAGCAGCGTCGA
TCTCGAATTTAAAAAGGGTGAATTCTGCGGATTGATTGGGCCCAGCGGCTCTGGCAAGACTACGCTGTTAAACATTATTG
GCGCTCTTGATGCTCCCTCAGAGGGCAGCGTTGTTGTCATAGACAGGAATGTAGAAAACTTGTCCCATAAGGAATCCGCT
CAATTGCGGAACCACCATATCGGTTTTATTTTTCAGACGTACAACCTTTTTCCTGTCTATAACGTTTACGAAAATATAGA
ATTTCCCCTATTGCTTCTTAAAATACCTCAAAAGGAAAGGAAGGAAAAGATATTTGATGCCCTGGAGTGGCTTGGCTTGA
CAGACAAGATCGATTCGAGGCCTTCGCAGCTTTCTGGAGGGGAGTGTCAGCGGGTGGCGGTGGCCAGGGCCGTAGTGAAA
CGACCAGAATTGATCTTAGCTGATGAACCTACCGCTAATCTCGACAGTGAAAACTCTTACAATATTTTGGAAATGATGGT
GAGGCTCAACAAAGAACTTGAAACCACCTTTATTTTTGCCACCCATGATGAAAAGGTGATGAAATATCTCAGGAGGAAGA
TCCATTTGTTCGATGGACGGGTCGCGCAGGATGAAATAATTTCTGAAGGAGCCCACTAG

Protein sequence : 
MPIVNIKELTKRYPMGDHTFTALSSVDLEFKKGEFCGLIGPSGSGKTTLLNIIGALDAPSEGSVVVIDRNVENLSHKESA
QLRNHHIGFIFQTYNLFPVYNVYENIEFPLLLLKIPQKERKEKIFDALEWLGLTDKIDSRPSQLSGGECQRVAVARAVVK
RPELILADEPTANLDSENSYNILEMMVRLNKELETTFIFATHDEKVMKYLRRKIHLFDGRVAQDEIISEGAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amico_1329 YP_003554171.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-33 42
Amico_1329 YP_003554171.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-31 42